RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 LRRC37A2A6NM11 1700 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 FNDC1Q4ZHG4 1894 aaPredicted RBP9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 TRAV14DV4A0A0A6YYC5 116 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 BCAT2O15382 392 aaPredicted RBP9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 DLEU1O43261 78 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 S1PR1P21453 382 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 NDUFS1P28331 727 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 HTR2CP28335 458 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 MSX1P28360 303 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 UBE2R2Q712K3 238 aaPredicted RBP9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 SLC36A1Q7Z2H8 476 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 BPIFB2Q8N4F0 458 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 ARRDC2Q8TBH0 407 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 AKR1E2Q96JD6 320 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 DDA1Q9BW61 102 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 A0A0G2JK05 382 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 OR5H15A6NDH6 313 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 OR5H1A6NKK0 313 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 DVL2O14641 736 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 KDELR3O43731 214 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 HYAL3O43820 417 aaPredicted RBP9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 MPIP34949 423 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 DVL1P1P54792 670 aaPredicted RBP9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 LMAN2Q12907 356 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 CERS6Q6ZMG9 384 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 Q6ZVU0 165 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 TMPRSS11BQ86T26 416 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 ZBTB2Q8N680 514 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 OR2AP1Q8NGE2 309 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 OR1J1Q8NGS3 322 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 MRI1Q9BV20 369 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 P2RY12Q9H244 342 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 CCDC86Q9H6F5 360 aaKnown RBP9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 SEMA4GQ9NTN9 838 aa9.98□□□□□ -0.81
CLSTN3-207ENST00000537408 OR52A4PA6NMU1 304 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 UPK3BL1B0FP48 263 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 UPK3BL2E5RIL1 263 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 COL9A1P20849 921 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 MMP11P24347 488 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 LTBRP36941 435 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 PTH2RP49190 550 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 CDKN1CP49918 316 aaPredicted RBP9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 LYPLAL1Q5VWZ2 237 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 PLBD1Q6P4A8 553 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 DRAM2Q6UX65 266 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 GLB1L2Q8IW92 636 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 PRSS58Q8IYP2 241 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 OR4D9Q8NGE8 314 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 NUBPLQ8TB37 319 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 CXorf40BQ96DE9 158 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 TGM7Q96PF1 710 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 WRAP53Q9BUR4 548 aaKnown RBP9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 MED17Q9NVC6 651 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 FFAR1O14842 300 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 SLC31A1O15431 190 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 CD8AP01732 235 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 METTL15P1P0C7V9 234 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 CBFBQ13951 182 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 DOC2AQ14183 400 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 OR2A2Q6IF42 318 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 WDR13Q9H1Z4 485 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 PHPT1Q9NRX4 125 aaPredicted RBP9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 DOK5Q9P104 306 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 ADAM18Q9Y3Q7 739 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 PTBP3O95758 552 aaKnown RBP9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 CH25HO95992 272 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 C1SP09871 688 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 AKAIN1P0CW23 69 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 ACVR1BP36896 505 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 P2RX1P51575 399 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 SKP1P63208 163 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 NAAAQ02083 359 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 TCEA2Q15560 299 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 CDPF1Q6NVV7 123 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 OVCH1Q7RTY7 1134 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 OR6N1Q8NGY5 312 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 INPP5EQ9NRR6 644 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 TMEM100Q9NV29 134 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 LPAR3Q9UBY5 353 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 CD84Q9UIB8 345 aa9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 AK6Q9Y3D8 172 aaKnown RBP9.97□□□□□ -0.81
CLSTN3-207ENST00000537408 AGPAT2O15120 278 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 FBXO24O75426 580 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 SNRPCP09234 159 aaKnown RBP9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 FABP4P15090 132 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 HMGA1P17096 107 aaKnown RBP9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 DUSP3P51452 185 aaPredicted RBP9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 ZNF84P51523 738 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 GAGE1Q13065 139 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 SLC10A1Q14973 349 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 GRHL2Q6ISB3 625 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 UNQ6494/PRO21346Q6UXR6 183 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 TMED4Q7Z7H5 227 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 PIANPQ8IYJ0 282 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 OR5AK3PQ8NH89 298 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 S1PR5Q9H228 398 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 EPHX3Q9H6B9 360 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 EGLN3Q9H6Z9 239 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 ISG20L2Q9H9L3 353 aaKnown RBP9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 UBQLN4Q9NRR5 601 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms