RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 PATE4P0C8F1 98 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 USF1P22415 310 aaPredicted RBP12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 GIPRP48546 466 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 ZP4Q12836 540 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 PIN1Q13526 163 aaPredicted RBP12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 C6orf52Q5T4I8 152 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 ERICH5Q6P6B1 374 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 NKAIN4Q8IVV8 208 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 ZCCHC24Q8N2G6 241 aaKnown RBP12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 POU5F2Q8N7G0 328 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 PCYOX1LQ8NBM8 494 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 IL17RDQ8NFM7 739 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 TMEM54Q969K7 222 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 ZNF566Q969W8 418 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 TPD52L3Q96J77 140 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 MDFIQ99750 246 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 PIMREGQ9BSJ6 248 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 ZNF426Q9BUY5 554 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 GID8Q9NWU2 228 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 ZNF224Q9NZL3 707 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 ARMCX1Q9P291 453 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 CAPN7Q9Y6W3 813 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 ARFGEF3Q5TH69 2177 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 SONP18583 2426 aaKnown RBP12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 FAM220BPB1ANY3 271 aa12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 BCL10O95999 233 aa12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 IFNA14P01570 189 aa12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 MT-ND1P03886 318 aa12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 F13BP05160 661 aa12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 ASAH2BP0C7U1 165 aa12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 ZNF14P17017 642 aaPredicted RBP12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 ZNF16P17020 682 aaPredicted RBP12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 PPOXP50336 477 aa12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 UGT2B15P54855 530 aa12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 RAB1AP62820 205 aa12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 VLDLRP98155 873 aa12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 CYBRD1Q53TN4 286 aa12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 ZNF627Q7L945 461 aa12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 SKA3Q8IX90 412 aa12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 CDK20Q8IZL9 346 aa12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 OR2T12Q8NG77 320 aa12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 RCN3Q96D15 328 aa12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 SLC25A44Q96H78 314 aaPredicted RBP12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 FOXN4Q96NZ1 517 aa12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 RAB1BQ9H0U4 201 aa12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 DYNLRB1Q9NP97 96 aa12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 C20orf141Q9NUB4 165 aa12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 RIMS3Q9UJD0 308 aa12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 CHD3Q12873 2000 aaKnown RBP12.35□□□□□ -0.43
RTN3P1-201ENST00000536295 TMEM129A0AVI4 362 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 MCIDASD6RGH6 385 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 OR7A10O76100 309 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 UBL3O95164 117 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 OR5F1O95221 314 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 ERCC1P07992 297 aaPredicted RBP12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 QDPRP09417 244 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 PGA4P0DJD7 388 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 PGA3P0DJD8 388 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 IGHV4-31P0DP07 118 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 FUT1P19526 365 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 NR4A1P22736 598 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 KDELR2P33947 212 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 NR4A2P43354 598 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 CLRN1P58418 232 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 LSM11P83369 360 aaKnown RBP eCLIP12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 MYBPC1Q00872 1141 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 RPL18Q07020 188 aaKnown RBP12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 RAB39AQ14964 217 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 IQCCQ4KMZ1 466 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 HSP90B2PQ58FF3 399 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 GKAP1Q5VSY0 366 aaPredicted RBP12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 CYB5R2Q6BCY4 276 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 LRFN4Q6PJG9 635 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 PIWIL3Q7Z3Z3 882 aaKnown RBP12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 HIPK1Q86Z02 1210 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 SLC22A24Q8N4F4 322 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 FGFBP3Q8TAT2 258 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 TMEM239Q8WW34 195 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 SGTBQ96EQ0 304 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 ZNF75AQ96N20 296 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 KCNK17Q96T54 332 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 DOK1Q99704 481 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 SH3GL3Q99963 347 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 TPK1Q9H3S4 243 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 GMPR2Q9P2T1 348 aaKnown RBP12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 CMAHPQ9Y471 501 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 SPEF1Q9Y4P9 236 aa12.34□□□□□ -0.43
RTN3P1-201ENST00000536295 LOC390937A0A1W2PQ73 354 aa12.33□□□□□ -0.44
RTN3P1-201ENST00000536295 A0A1W2PRG6 482 aa12.33□□□□□ -0.44
RTN3P1-201ENST00000536295 VWC2LB2RUY7 222 aa12.33□□□□□ -0.44
RTN3P1-201ENST00000536295 NDUFS8O00217 210 aa12.33□□□□□ -0.44
RTN3P1-201ENST00000536295 DHHO43323 396 aa12.33□□□□□ -0.44
RTN3P1-201ENST00000536295 PIP5K1CO60331 668 aa12.33□□□□□ -0.44
RTN3P1-201ENST00000536295 IGHG1P01857 330 aa12.33□□□□□ -0.44
RTN3P1-201ENST00000536295 ADRA2AP08913 450 aa12.33□□□□□ -0.44
RTN3P1-201ENST00000536295 OR8G3PP0DMU2 310 aa12.33□□□□□ -0.44
RTN3P1-201ENST00000536295 ZNF35P13682 527 aa12.33□□□□□ -0.44
RTN3P1-201ENST00000536295 AQP2P41181 271 aa12.33□□□□□ -0.44
RTN3P1-201ENST00000536295 RBM34P42696 430 aaKnown RBP12.33□□□□□ -0.44
RTN3P1-201ENST00000536295 GALK2Q01415 458 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms