RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 SMIM10Q96HG1 83 aa6.3□□□□□ -1.4
CPSF7-215ENST00000536145 GPX7Q96SL4 187 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-215ENST00000536145 SMAD5Q99717 465 aaKnown RBP6.3□□□□□ -1.4
CPSF7-215ENST00000536145 NRIP2Q9BQI9 281 aa6.3□□□□□ -1.4
CPSF7-215ENST00000536145 ZNF471Q9BX82 626 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-215ENST00000536145 SLITRK2Q9H156 845 aa6.3□□□□□ -1.4
CPSF7-215ENST00000536145 TSPAN10Q9H1Z9 355 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-215ENST00000536145 POFUT1Q9H488 388 aa6.3□□□□□ -1.4
CPSF7-215ENST00000536145 EXO5Q9H790 373 aa6.3□□□□□ -1.4
CPSF7-215ENST00000536145 TCF7L1Q9HCS4 588 aa6.3□□□□□ -1.4
CPSF7-215ENST00000536145 TMEM138Q9NPI0 162 aa6.3□□□□□ -1.4
CPSF7-215ENST00000536145 PRDM9Q9NQV7 894 aa6.3□□□□□ -1.4
CPSF7-215ENST00000536145 POLE3Q9NRF9 147 aa6.3□□□□□ -1.4
CPSF7-215ENST00000536145 SLC22A11Q9NSA0 550 aa6.3□□□□□ -1.4
CPSF7-215ENST00000536145 FBXO34Q9NWN3 711 aa6.3□□□□□ -1.4
CPSF7-215ENST00000536145 SLC2A8Q9NY64 477 aa6.3□□□□□ -1.4
CPSF7-215ENST00000536145 FRRS1LQ9P0K9 344 aa6.3□□□□□ -1.4
CPSF7-215ENST00000536145 RCC2Q9P258 522 aaKnown RBP6.3□□□□□ -1.4
CPSF7-215ENST00000536145 UPB1Q9UBR1 384 aa6.3□□□□□ -1.4
CPSF7-215ENST00000536145 FBXL21Q9UKT6 434 aa6.3□□□□□ -1.4
CPSF7-215ENST00000536145 EDARQ9UNE0 448 aa6.3□□□□□ -1.4
CPSF7-215ENST00000536145 C19orf53Q9UNZ5 99 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-215ENST00000536145 KLHDC2Q9Y2U9 406 aa6.3□□□□□ -1.4
CPSF7-215ENST00000536145 IER3IP1Q9Y5U9 82 aa6.3□□□□□ -1.4
CPSF7-215ENST00000536145 TRAV18A0A075B6X5 111 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 A0A087WV62 115 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 NPIPA5A0A0B4J1W7 369 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 TEX13DA0A0J9YY54 714 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-215ENST00000536145 CPED1A4D0V7 1026 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 DBX1A6NMT0 343 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 EFCAB7A8K855 629 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 MCIDASD6RGH6 385 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 C1QTNF3-AMACRE9PGA6 284 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 NPIPA7E9PJI5 369 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 BLOC1S5-TXNDC5H3BN57 136 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 PEX12O00623 359 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 GNB5O14775 395 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 SGCEO43556 437 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 FOXS1O43638 330 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 OR2T1O43869 369 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 LILRB3O75022 631 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 ICOSLGO75144 302 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 ALOX12BO75342 701 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 CXCL14O95715 111 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 RAB3DO95716 219 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 STATHP02808 62 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 ANXA2P07355 339 aaKnown RBP6.29□□□□□ -1.4
CPSF7-215ENST00000536145 CISD3P0C7P0 127 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 NPIPA8P0DM63 369 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 OR8G3PP0DMU2 310 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 C6P13671 934 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 PRF1P14222 555 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 NFYBP25208 207 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 DDX6P26196 483 aaKnown RBP eCLIP6.29□□□□□ -1.4
CPSF7-215ENST00000536145 CD34P28906 385 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 PEBP1P30086 187 aaKnown RBP6.29□□□□□ -1.4
CPSF7-215ENST00000536145 PRSS3P35030 304 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 KIR3DL2P43630 455 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 ATP1B3P54709 279 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 STARD6P59095 220 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 TAS2R19P59542 299 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 RPS4XP62701 263 aaKnown RBP6.29□□□□□ -1.4
CPSF7-215ENST00000536145 BLOC1S1P78537 153 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 PDZK1IP1Q13113 114 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 DHRS2Q13268 280 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 PON3Q15166 354 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 MLF2Q15773 248 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-215ENST00000536145 NKPD1Q17RQ9 610 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 C4orf46Q504U0 113 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 DCST2Q5T1A1 773 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 TMEM244Q5VVB8 128 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 SLC39A5Q6ZMH5 540 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 DPY19L2P2Q6ZN68 376 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 USP53Q70EK8 1073 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 ABHD13Q7L211 337 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 TMPRSS9Q7Z410 1059 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 LYG2Q86SG7 212 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 SLC25A42Q86VD7 318 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 AMZ2Q86W34 360 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 TMPRSS12Q86WS5 348 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 ANGPTL5Q86XS5 388 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 CDC20BQ86Y33 519 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 LRRC25Q8N386 305 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-215ENST00000536145 GALNT16Q8N428 558 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 C15orf54Q8N8G6 183 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 OR1J2Q8NGS2 313 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 ZNF417Q8TAU3 575 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 THAP6Q8TBB0 222 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 NT5CQ8TCD5 201 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 PHOSPHO1Q8TCT1 267 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 GPR148Q8TDV2 347 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 IRF7Q92985 503 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 WNT2BQ93097 391 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 HIST1H2BAQ96A08 127 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 MRGPRFQ96AM1 343 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 OTUB2Q96DC9 234 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 ZC3H10Q96K80 434 aaKnown RBP6.29□□□□□ -1.4
CPSF7-215ENST00000536145 ARL5BQ96KC2 179 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 Q96M85 177 aa6.29□□□□□ -1.4
CPSF7-215ENST00000536145 HSPA12BQ96MM6 686 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms