RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 MMEL1Q495T6 779 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 RGS7BPQ6MZT1 257 aaPredicted RBP11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 IL17RELQ6ZVW7 336 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 SLC35D2Q76EJ3 337 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 TMEM123Q8N131 208 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 ARIH2OSQ8N7S6 290 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 SMYD1Q8NB12 490 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 VANGL1Q8TAA9 524 aaPredicted RBP11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 C11orf40Q8WZ69 217 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 RDH5Q92781 318 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 SLC41A3Q96GZ6 507 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 SIKE1Q9BRV8 207 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 C19orf24Q9BVV8 132 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 SLC19A3Q9BZV2 496 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 NELFAQ9H3P2 528 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 OCEL1Q9H607 264 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 INTS9Q9NV88 658 aaKnown RBP11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 ARGLU1Q9NWB6 273 aaPredicted RBP11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 SLCO1C1Q9NYB5 712 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 METRNQ9UJH8 293 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 CHST2Q9Y4C5 530 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 TRAPPC13A5PLN9 417 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 MS4A18H0YCH9 400 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 KPNA4O00629 521 aaPredicted RBP11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 PLPP3O14495 311 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 CH25HO95992 272 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 LCKP06239 509 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 SAGP10523 405 aaPredicted RBP11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 ACHEP22303 614 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 APLNRP35414 380 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 TAS2R41P59536 307 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 HSF2Q03933 536 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 CYLC2Q14093 348 aaPredicted RBP11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 CCNIQ14094 377 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 MS4A18Q3C1V0 323 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 PCGF3Q3KNV8 242 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 RINLQ6ZS11 566 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 SLC16A14Q7RTX9 510 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 TREML1Q86YW5 311 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 CDK20Q8IZL9 346 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 ICA1LQ8NDH6 482 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 OR6X1Q8NH79 312 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 TIMD4Q96H15 378 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 SYT3Q9BQG1 590 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 BCL2L14Q9BZR8 327 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 CCNB1IP1Q9NPC3 277 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 SLCO1B3Q9NPD5 702 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 DECR2Q9NUI1 292 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 SLC25A37Q9NYZ2 338 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 GLTPQ9NZD2 209 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 EIF3KQ9UBQ5 218 aaKnown RBP11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 ZNF229Q9UJW7 825 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 PLCE1Q9P212 2302 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 RTTNQ86VV8 2226 aa11.44□□□□□ -0.58
CLSTN3-205ENST00000535452 IGKV1D-42A0A075B6H8 117 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 M0QX08 132 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 M0R3H8 397 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 PPIHO43447 177 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 TPST1O60507 370 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 MFN2O95140 757 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 TFP02787 698 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 BGLAPP02818 100 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 SERPINA5P05154 406 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 TACSTD2P09758 323 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 DAP3P51398 398 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 DVL1P1P54792 670 aaPredicted RBP11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 TMEM33P57088 247 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 PAGE3Q5JUK9 113 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 ENTPD8Q5MY95 495 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 SLC22A24Q8N4F4 322 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 CPEB3Q8NE35 698 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 SLC30A7Q8NEW0 376 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 OR51F2Q8NH61 342 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 ADAMTS16Q8TE57 1224 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 SLC25A44Q96H78 314 aaPredicted RBP11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 TXNDC15Q96J42 360 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 ATP6V1G3Q96LB4 118 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 MOGAT1Q96PD6 335 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 EBF4Q9BQW3 602 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 MRPL37Q9BZE1 423 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 NDEL1Q9GZM8 345 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 ZNF385DQ9H6B1 395 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 SEC61A2Q9H9S3 476 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 SLAMF8Q9P0V8 285 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 BAG5Q9UL15 447 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 SLC7A7Q9UM01 511 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 GMEB1Q9Y692 573 aa11.43□□□□□ -0.58
CLSTN3-205ENST00000535452 ATRQ13535 2644 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 ZANQ9Y493 2812 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 PLSCR5A0PG75 271 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 BLOC1S5-TXNDC5H3BN57 136 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 FZD7O75084 574 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 OPN1SWP03999 348 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 HLA-DOBP13765 273 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 TCN1P20061 433 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 GCH1P30793 250 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 KLF3P57682 345 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 MTPNP58546 118 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 RAB39AQ14964 217 aa11.42□□□□□ -0.58
CLSTN3-205ENST00000535452 MAPRE2Q15555 327 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms