RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 GRINAQ7Z429 371 aa16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 SMAP2Q8WU79 429 aaPredicted RBP16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 SHARPINQ9H0F6 387 aa16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 SIGLEC1Q9BZZ2 1709 aa16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 NDUFB7P17568 137 aa16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 ADPRHP54922 357 aa16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 MAML2Q8IZL2 1156 aaPredicted RBP16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 SIRT6Q8N6T7 355 aa16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 OR1E3Q8WZA6 343 aa16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 MBNL1Q9NR56 388 aaKnown RBP16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 MUTYHQ9UIF7 546 aa16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 USP22Q9UPT9 525 aa16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 TCHHQ07283 1943 aa16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 ARHGAP33O14559 1287 aa16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 SELEP16581 610 aa16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 NAGAP17050 411 aa16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 HTR1FP30939 366 aa16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 GDNFP39905 211 aa16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 TLE4Q04727 773 aa16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 ELAVL1Q15717 326 aaKnown RBP16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 COX20Q5RI15 118 aa16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 YOD1Q5VVQ6 348 aaPredicted RBP16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 OVCH1Q7RTY7 1134 aa16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 DCXRQ7Z4W1 244 aa16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 NAXDQ8IW45 347 aa16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 OR5M1Q8NGP8 315 aa16.74■□□□□ 0.27
SFSWAP-203ENST00000535236 PHF1O43189 567 aaPredicted RBP16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 SPCS2Q15005 226 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 SHHQ15465 462 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 TATDN3Q17R31 274 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 FAM53CQ9NYF3 392 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 MMP17Q9ULZ9 603 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 CCDC88AQ3V6T2 1871 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 AKR7A3O95154 331 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 IRS1P35568 1242 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 ILKQ13418 452 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 GALEQ14376 348 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 STACQ99469 402 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 SLC39A9Q9NUM3 307 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 CTDSP2O14595 271 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 DEGS1O15121 323 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 IGHV3-9P01782 118 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 FPR3P25089 353 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 HIST2H3PS2Q5TEC6 136 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 SFXN4Q6P4A7 337 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 SLC43A2Q8N370 569 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 HEYLQ9NQ87 328 aaPredicted RBP16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 CEPT1Q9Y6K0 416 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 A0A0B4J2A0 478 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 HOXC11O43248 304 aaPredicted RBP16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 NPPBP16860 134 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 SHC1P29353 583 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 APOBEC1P41238 236 aaKnown RBP16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 MTNR1BP49286 362 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 MAP2K6P52564 334 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 ZNF133P52736 654 aaPredicted RBP16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 PFN3P60673 137 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 YIF1BQ5BJH7 314 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 LILRA3Q8N6C8 439 aaPredicted RBP16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 NKAIN3Q8N8D7 197 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 FAM71CQ8NEG0 241 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 RASD2Q96D21 266 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 KIRREL1Q96J84 757 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 RTL8AQ9BWD3 113 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 FAM212BQ9NTI7 297 aaPredicted RBP16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 NECAP2Q9NVZ3 263 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 SHPKQ9UHJ6 478 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 PDE4DIPQ5VU43 2346 aa16.73■□□□□ 0.27
SFSWAP-203ENST00000535236 OGFOD3Q6PK18 319 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 DEFB123Q8N688 67 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 PLPP5Q8NEB5 264 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 UTP4Q969X6 686 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 ASB16Q96NS5 453 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 DCLRE1CQ96SD1 692 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 MYH1P12882 1939 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 ZNF705GA8MUZ8 300 aaPredicted RBP16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 EFSO43281 561 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 FADS1O60427 444 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 HBE1P02100 147 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 UBE2KP61086 200 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 SLC35D3Q5M8T2 416 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 CGB2Q6NT52 195 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 ZNF511Q8NB15 262 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 BHLHE23Q8NDY6 225 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 ZNF583Q96ND8 569 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 DEFB127Q9H1M4 99 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 UBE2ZQ9H832 354 aaPredicted RBP16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 HLA-DOBP13765 273 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 FKBP2P26885 142 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 CMTM2Q8TAZ6 248 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 CHTF18Q8WVB6 975 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 F6UZH7 168 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 HSD17B6O14756 317 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 GCAP28676 217 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 SLC35A4Q96G79 324 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 METTL17Q9H7H0 456 aaPredicted RBP16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 FGF22Q9HCT0 170 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 NDRG4Q9ULP0 352 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 NPFFR2Q9Y5X5 522 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 NRG2O14511 850 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms