RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 METTL11BQ5VVY1 283 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 AGAP6Q5VW22 663 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 FAM46CQ5VWP2 391 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 PRAMEF7Q5VXH5 474 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 ARCQ7LC44 396 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 PRSS48Q7RTY5 328 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 SETD3Q86TU7 594 aaPredicted RBP2.83□□□□□ -1.96
USP48-215ENST00000534705 PHF13Q86YI8 300 aaPredicted RBP2.83□□□□□ -1.96
USP48-215ENST00000534705 ZDHHC21Q8IVQ6 265 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 CPNE9Q8IYJ1 553 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 RCOR2Q8IZ40 523 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 Q8N377 158 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 PARP8Q8N3A8 854 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 LIX1Q8N485 282 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 PACRGLQ8N7B6 248 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 BCORP1Q8N888 145 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 Q8N9G6 341 aaPredicted RBP2.83□□□□□ -1.96
USP48-215ENST00000534705 Q8NBF4 154 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 C17orf47Q8NEP4 570 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 OR2T34Q8NGX1 318 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 AKR7LQ8NHP1 331 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 JOSD2Q8TAC2 188 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 RAB3IL1Q8TBN0 382 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 PNPT1Q8TCS8 783 aaKnown RBP2.83□□□□□ -1.96
USP48-215ENST00000534705 SETD7Q8WTS6 366 aaKnown RBP2.83□□□□□ -1.96
USP48-215ENST00000534705 METTL21AQ8WXB1 218 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 S100ZQ8WXG8 99 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 MARC2Q969Z3 335 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 TSACCQ96A04 125 aaPredicted RBP2.83□□□□□ -1.96
USP48-215ENST00000534705 PINX1Q96BK5 328 aaKnown RBP2.83□□□□□ -1.96
USP48-215ENST00000534705 SGK3Q96BR1 496 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 ULK4Q96C45 1275 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 OMA1Q96E52 524 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 RMND5BQ96G75 393 aaPredicted RBP2.83□□□□□ -1.96
USP48-215ENST00000534705 FOXN4Q96NZ1 517 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 SERPINB11Q96P15 392 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 AGAP4Q96P64 663 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 RBM14Q96PK6 669 aaKnown RBP2.83□□□□□ -1.96
USP48-215ENST00000534705 RASL10BQ96S79 203 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 LGMNQ99538 433 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 CCDC3Q9BQI4 270 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 BBS2Q9BXC9 721 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 NMUR2Q9GZQ4 415 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 TRABDQ9H4I3 376 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 NARFLQ9H6Q4 476 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 WDR76Q9H967 626 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 CXorf21Q9HAI6 301 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 ANKHQ9HCJ1 492 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 FBXO6Q9NRD1 293 aaPredicted RBP2.83□□□□□ -1.96
USP48-215ENST00000534705 SMOXQ9NWM0 555 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 PAK1IP1Q9NWT1 392 aaPredicted RBP2.83□□□□□ -1.96
USP48-215ENST00000534705 PAQR5Q9NXK6 330 aaPredicted RBP2.83□□□□□ -1.96
USP48-215ENST00000534705 B3GNT2Q9NY97 397 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 CNOT2Q9NZN8 540 aaKnown RBP2.83□□□□□ -1.96
USP48-215ENST00000534705 DEC1Q9P2X7 70 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 THAP10Q9P2Z0 257 aaPredicted RBP2.83□□□□□ -1.96
USP48-215ENST00000534705 MBD2Q9UBB5 411 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 BCAP29Q9UHQ4 241 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 LSM7Q9UK45 103 aaKnown RBP2.83□□□□□ -1.96
USP48-215ENST00000534705 PACSIN2Q9UNF0 486 aaPredicted RBP2.83□□□□□ -1.96
USP48-215ENST00000534705 SNX24Q9Y343 169 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 RBMX2Q9Y388 322 aaKnown RBP2.83□□□□□ -1.96
USP48-215ENST00000534705 ZNF175Q9Y473 711 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 AP4S1Q9Y587 144 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 OR51B4Q9Y5P0 310 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 TPRP12270 2363 aaKnown RBP2.83□□□□□ -1.96
USP48-215ENST00000534705 CHD8Q9HCK8 2581 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 SPTBP11277 2137 aa2.83□□□□□ -1.96
USP48-215ENST00000534705 LAMA5O15230 3695 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 DMXL2Q8TDJ6 3036 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 NCOR2Q9Y618 2525 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 NUP210LQ5VU65 1888 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 USP24Q9UPU5 2620 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 IGLV3-10A0A075B6K4 115 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 A0A075B6Q4 140 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 IGHV1OR15-9A0A0B4J2B8 117 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 C1orf232A0A0U1RR37 186 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 ANKDD1BA6NHY2 528 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 ZNF98A6NK75 572 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 A8MU76 341 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 LEUTXA8MZ59 168 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 K7EQD1 137 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 CCRL2O00421 344 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 TFECO14948 347 aaPredicted RBP2.82□□□□□ -1.96
USP48-215ENST00000534705 GATCO43716 136 aaKnown RBP2.82□□□□□ -1.96
USP48-215ENST00000534705 TBL1XO60907 577 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 B4GALT2O60909 372 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 UGT2B11O75310 529 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 KCNK2O95069 426 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 LSM8O95777 96 aaKnown RBP2.82□□□□□ -1.96
USP48-215ENST00000534705 CD160O95971 181 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 IGLV3-19P01714 112 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 FGGP02679 453 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 C1QAP02745 245 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 CSF2P04141 144 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 SERPINF2P08697 491 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 HOXD4P09016 255 aaPredicted RBP2.82□□□□□ -1.96
USP48-215ENST00000534705 ANKRD34CP0C6C1 535 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 RRASP10301 218 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 MYL2P10916 166 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms