RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	BCL2L2	Q92843	193 aa	Predicted RBP	10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	DNAJA3	Q96EY1	480 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	AURKB	Q96GD4	344 aa	Predicted RBP	10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	ZNF385A	Q96PM9	386 aa	Known RBP	10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	SLC35A5	Q9BS91	424 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	PAIP1	Q9H074	479 aa	Known RBP	10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	PCDHAC1	Q9H158	963 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	VCX3B	Q9H321	246 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	ACTR3B	Q9P1U1	418 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	MAGEL2	Q9UJ55	1249 aa		10.03	□□□□□ -0.8
CTNND1-238	ENST00000534647	AQP12B	A6NM10	295 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	AKR7A3	O95154	331 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	TGFA	P01135	160 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	DBI	P07108	87 aa	Known RBP	10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	TACSTD2	P09758	323 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	IL7R	P16871	459 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	PPIB	P23284	216 aa	Known RBP	10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	CXCR1	P25024	350 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	CHI3L1	P36222	383 aa	Predicted RBP	10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	VHL	P40337	213 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	ACAA2	P42765	397 aa	Known RBP	10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	IDH3G	P51553	393 aa	Predicted RBP	10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	MTPN	P58546	118 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	NAAA	Q02083	359 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	SYPL1	Q16563	259 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	TMEM225	Q6GV28	225 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	CYP2R1	Q6VVX0	501 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	CREB3L2	Q70SY1	520 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	AQP12A	Q8IXF9	295 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	RFLNB	Q8N5W9	214 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	TRIML2	Q8N7C3	387 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	ANKFN1	Q8N957	763 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	NUP37	Q8NFH4	326 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	NEU4	Q8WWR8	484 aa	Predicted RBP	10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	LINC00470	Q9BZP3	86 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	RAB1B	Q9H0U4	201 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	HEATR1	Q9H583	2144 aa	Known RBP	10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	ZNF442	Q9H7R0	627 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	VAPA	Q9P0L0	249 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	CORO2B	Q9UQ03	480 aa		10.02	□□□□□ -0.81
CTNND1-238	ENST00000534647	CDHR4	A6H8M9	788 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647		A8MVM7	634 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	FAM220BP	B1ANY3	271 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	ZNF587B	E7ETH6	402 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	RPL36A-HNRNPH2	H7BZ11	118 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	ARPC2	O15144	300 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	NPIPB7	O75200	414 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	IGKV3-15	P01624	115 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	GSN	P06396	782 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	CHRM4	P08173	479 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	OR4A8	P0C604	315 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	ZCCHC18	P0CG32	403 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	MECP2	P51608	486 aa	Known RBP	10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	SH3BGR	P55822	239 aa	Predicted RBP	10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	POU3F1	Q03052	451 aa	Predicted RBP	10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	OR7A5	Q15622	319 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	GTDC1	Q4AE62	458 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	IQCC	Q4KMZ1	466 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	MRPL2	Q5T653	305 aa	Known RBP	10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	ZBTB37	Q5TC79	503 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	LCN8	Q6JVE9	175 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	UGT2A3	Q6UWM9	527 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	SLC46A3	Q7Z3Q1	461 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	HMGN2P46	Q86SG4	172 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	RNF130	Q86XS8	419 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	PEX5L	Q8IYB4	626 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	ZBTB34	Q8NCN2	500 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	OR2T12	Q8NG77	320 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	OR10A6	Q8NH74	314 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	NSMCE2	Q96MF7	247 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	DOK1	Q99704	481 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	VRK1	Q99986	396 aa	Predicted RBP	10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	KCNS3	Q9BQ31	491 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	CPPED1	Q9BRF8	314 aa	Predicted RBP	10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	BPESC1	Q9GZL8	116 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	CHODL	Q9H9P2	273 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	RASD1	Q9Y272	281 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	DSPP	Q9NZW4	1301 aa		10.01	□□□□□ -0.81
CTNND1-238	ENST00000534647	TRBV5-3	A0A0A0MS03	114 aa		10	□□□□□ -0.81
CTNND1-238	ENST00000534647	TCRBV3S1	A0A5B6	114 aa		10	□□□□□ -0.81
CTNND1-238	ENST00000534647	ELOVL7	A1L3X0	281 aa		10	□□□□□ -0.81
CTNND1-238	ENST00000534647	CLIC1	O00299	241 aa		10	□□□□□ -0.81
CTNND1-238	ENST00000534647	FZD7	O75084	574 aa		10	□□□□□ -0.81
CTNND1-238	ENST00000534647	KRT33A	O76009	404 aa		10	□□□□□ -0.81
CTNND1-238	ENST00000534647	LGI1	O95970	557 aa		10	□□□□□ -0.81
CTNND1-238	ENST00000534647	C1QC	P02747	245 aa		10	□□□□□ -0.81
CTNND1-238	ENST00000534647	TFPT	P0C1Z6	253 aa		10	□□□□□ -0.81
CTNND1-238	ENST00000534647	CECR9	P0C854	216 aa		10	□□□□□ -0.81
CTNND1-238	ENST00000534647	CBR1	P16152	277 aa		10	□□□□□ -0.81
CTNND1-238	ENST00000534647	CDH2	P19022	906 aa	Predicted RBP	10	□□□□□ -0.81
CTNND1-238	ENST00000534647	ECI1	P42126	302 aa		10	□□□□□ -0.81
CTNND1-238	ENST00000534647	CDKN2C	P42773	168 aa		10	□□□□□ -0.81
CTNND1-238	ENST00000534647	PTDSS1	P48651	473 aa	Known RBP	10	□□□□□ -0.81
CTNND1-238	ENST00000534647	CHN2	P52757	468 aa		10	□□□□□ -0.81
CTNND1-238	ENST00000534647	UBE2N	P61088	152 aa	Known RBP	10	□□□□□ -0.81
CTNND1-238	ENST00000534647	SELPLG	Q14242	412 aa		10	□□□□□ -0.81
CTNND1-238	ENST00000534647	MAPK11	Q15759	364 aa		10	□□□□□ -0.81
CTNND1-238	ENST00000534647	CYP51A1	Q16850	503 aa		10	□□□□□ -0.81
CTNND1-238	ENST00000534647	CR1L	Q2VPA4	569 aa		10	□□□□□ -0.81
CTNND1-238	ENST00000534647	TMEM177	Q53S58	311 aa		10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms