RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 CMAHPQ9Y471 501 aa7.7□□□□□ -1.18
COPB1-211ENST00000534234 SPEF1Q9Y4P9 236 aa7.7□□□□□ -1.18
COPB1-211ENST00000534234 FBN1P35555 2871 aaKnown RBP7.69□□□□□ -1.18
COPB1-211ENST00000534234 RNF212BA8MTL3 300 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 BLOC1S5-TXNDC5H3BN57 136 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 STAMBPO95630 424 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 RAB36O95755 333 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 ADRA2AP08913 450 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 PATE4P0C8F1 98 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 UMPSP11172 480 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 ZNF35P13682 527 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 H2AFXP16104 143 aaPredicted RBP7.69□□□□□ -1.18
COPB1-211ENST00000534234 ZNF14P17017 642 aaPredicted RBP7.69□□□□□ -1.18
COPB1-211ENST00000534234 MMEL1Q495T6 779 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 RABL3Q5HYI8 236 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 FAM166AQ6J272 317 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 LRFN4Q6PJG9 635 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 CCDC80Q76M96 950 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 SKA3Q8IX90 412 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 ARIH2OSQ8N7S6 290 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 TMEM54Q969K7 222 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 ZNF566Q969W8 418 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 MSI2Q96DH6 328 aaKnown RBP7.69□□□□□ -1.18
COPB1-211ENST00000534234 SLC25A44Q96H78 314 aaPredicted RBP7.69□□□□□ -1.18
COPB1-211ENST00000534234 SH3GL1Q99961 368 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 PRSS27Q9BQR3 290 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 ZNF426Q9BUY5 554 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 TMEM120AQ9BXJ8 343 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 SLC19A3Q9BZV2 496 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 BPESC1Q9GZL8 116 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 PCDHAC1Q9H158 963 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 DYNLRB1Q9NP97 96 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 ZNF224Q9NZL3 707 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 LPAR3Q9UBY5 353 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 ZNF229Q9UJW7 825 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 KCNS2Q9ULS6 477 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 SH3GLB1Q9Y371 365 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 ATRQ13535 2644 aa7.69□□□□□ -1.18
COPB1-211ENST00000534234 UBL3O95164 117 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 BCL10O95999 233 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 TGFAP01135 160 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 NPPAP01160 153 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 VIMP08670 466 aaKnown RBP7.68□□□□□ -1.18
COPB1-211ENST00000534234 IGFBP1P08833 259 aaPredicted RBP7.68□□□□□ -1.18
COPB1-211ENST00000534234 ASAH2BP0C7U1 165 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 OR8G3PP0DMU2 310 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 ZNF23P17027 643 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 GIFP27352 417 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 GLRXP35754 106 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 EVX1P49640 407 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 CRYBA2P53672 197 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 GALK2Q01415 458 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 MELKQ14680 651 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 RAB39AQ14964 217 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 GKAP1Q5VSY0 366 aaPredicted RBP7.68□□□□□ -1.18
COPB1-211ENST00000534234 CARM1Q86X55 608 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 CDK20Q8IZL9 346 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 ZNF786Q8N393 782 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 SLC22A24Q8N4F4 322 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 FGFBP3Q8TAT2 258 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 UBASH3BQ8TF42 649 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 TMEM158Q8WZ71 300 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 MRPL24Q96A35 216 aaKnown RBP7.68□□□□□ -1.18
COPB1-211ENST00000534234 LRRC58Q96CX6 371 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 MRPL37Q9BZE1 423 aaKnown RBP7.68□□□□□ -1.18
COPB1-211ENST00000534234 MS4A5Q9H3V2 200 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 CHODLQ9H9P2 273 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 MEPEQ9NQ76 525 aaPredicted RBP7.68□□□□□ -1.18
COPB1-211ENST00000534234 BAG5Q9UL15 447 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 ABCA1O95477 2261 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 PLCE1Q9P212 2302 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 COL6A5A8TX70 2615 aa7.68□□□□□ -1.18
COPB1-211ENST00000534234 LOC100653049A0A140TA62 436 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 LRP5LA4QPB2 252 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 LYNX1G3V0Z9 82 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 DHHO43323 396 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 SYNGR3O43761 229 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 LILRA1O75019 489 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 ENTPD5O75356 428 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 SASH3O75995 380 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 KRT34O76011 436 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 FARS2O95363 451 aaKnown RBP7.67□□□□□ -1.18
COPB1-211ENST00000534234 MT-ND1P03886 318 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 SERPINA5P05154 406 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 QDPRP09417 244 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 PGA4P0DJD7 388 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 PGA3P0DJD8 388 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 LYNX1P0DP58 116 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 TROVE2P10155 538 aaKnown RBP eCLIP7.67□□□□□ -1.18
COPB1-211ENST00000534234 FUT1P19526 365 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 TNFRSF1BP20333 461 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 IGFBP5P24593 272 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 LSP1P33241 339 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 ARFIP2P53365 341 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 SF3A3Q12874 501 aaKnown RBP eCLIP7.67□□□□□ -1.18
COPB1-211ENST00000534234 KLF10Q13118 480 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 MSMPQ1L6U9 139 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 COQ5Q5HYK3 327 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 NANOGNBQ7Z5D8 188 aa7.67□□□□□ -1.18
COPB1-211ENST00000534234 CALHM3Q86XJ0 350 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms