RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 AGBL5Q8NDL9 886 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 VN1R2Q8NFZ6 395 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 ANKRD9Q96BM1 317 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-236ENST00000533667 CDCA4Q9BXL8 241 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 C11orf54Q9H0W9 315 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-236ENST00000533667 GCM1Q9NP62 436 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 MRPL22Q9NWU5 206 aaKnown RBP6.48□□□□□ -1.37
CTNND1-236ENST00000533667 COPS3Q9UNS2 423 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 HEMK1Q9Y5R4 338 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-236ENST00000533667 HCFC2Q9Y5Z7 792 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 A6NIN4 97 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 NDUFS8O00217 210 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 STK17BO94768 372 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 LALBAP00709 142 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 SMIM6P0DI80 62 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 FCGR2AP12318 317 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 CNR1P21554 472 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 KITLGP21583 273 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 APEX1P27695 318 aaKnown RBP6.47□□□□□ -1.37
CTNND1-236ENST00000533667 SLC35A2P78381 396 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 SQSTM1Q13501 440 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 ASAH1Q13510 395 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 IHHQ14623 411 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 SLC9A3R2Q15599 337 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 LRRC26Q2I0M4 334 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 PDLIM3Q53GG5 364 aaPredicted RBP6.47□□□□□ -1.37
CTNND1-236ENST00000533667 YOD1Q5VVQ6 348 aaPredicted RBP6.47□□□□□ -1.37
CTNND1-236ENST00000533667 SAXO2Q658L1 398 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 TBPL2Q6SJ96 375 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 MOB1BQ7L9L4 216 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 MDGA2Q7Z553 956 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 SIAH3Q8IW03 269 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 PRR18Q8N4B5 295 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 RHBDD1Q8TEB9 315 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 SLC25A43Q8WUT9 341 aaPredicted RBP6.47□□□□□ -1.37
CTNND1-236ENST00000533667 NXPE3Q969Y0 559 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 SLC25A46Q96AG3 418 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 PDXPQ96GD0 296 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 TRABD2BA6NFA1 517 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 TLCD2A6NGC4 264 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 TARM1B6A8C7 271 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 TGOLN2O43493 480 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 LGI1O95970 557 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 MAKP20794 623 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 LIPAP38571 399 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 RFX2P48378 723 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 ZP2Q05996 745 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 CAMK2BQ13554 666 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 COX20Q5RI15 118 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 Q6ZTK2 550 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 AAED1Q7RTV5 226 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 DPY19L4Q7Z388 723 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 ADIPOR2Q86V24 386 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 KLHDC9Q8NEP7 349 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 NLGN4YQ8NFZ3 816 aaPredicted RBP6.47□□□□□ -1.37
CTNND1-236ENST00000533667 OR13C9Q8NGT0 318 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 UBL7Q96S82 380 aaPredicted RBP6.47□□□□□ -1.37
CTNND1-236ENST00000533667 SMIM3Q9BZL3 60 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 ZBP1Q9H171 429 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 FBXO8Q9NRD0 319 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 SLC22A11Q9NSA0 550 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 MARCH5Q9NX47 278 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 NDRG4Q9ULP0 352 aaKnown RBP6.47□□□□□ -1.37
CTNND1-236ENST00000533667 SLC5A10A0PJK1 596 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 RFXAPO00287 272 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 GPR171O14626 319 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 SMIM18P0DKX4 95 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 MTHFD2P13995 350 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 SSR4P51571 173 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 HTR4Q13639 388 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 ZNF74Q16587 644 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 TMEM176BQ3YBM2 270 aaPredicted RBP6.47□□□□□ -1.37
CTNND1-236ENST00000533667 EMC4Q5J8M3 183 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 GTF2H5Q6ZYL4 71 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 CAMKMTQ7Z624 323 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 OR10K1Q8NGX5 313 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 IL1F10Q8WWZ1 152 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 FAM3DQ96BQ1 224 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 HHIPQ96QV1 700 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 NMNAT3Q96T66 252 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 C20orf85Q9H1P6 137 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 NCOR1P1Q9H4R4 102 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 MED20Q9H944 212 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 SPHK1Q9NYA1 384 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 CYB5R1Q9UHQ9 305 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 PLEKHM1Q9Y4G2 1056 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 AHDC1Q5TGY3 1603 aaPredicted RBP6.47□□□□□ -1.37
CTNND1-236ENST00000533667 GFYI3L273 518 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 KLK8O60259 260 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 SCRG1O75711 98 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 KLKB1P03952 638 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 ZNF728P0DKX0 622 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 SRMP19623 302 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 ACHEP22303 614 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 MMP11P24347 488 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 F2RL1P55085 397 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 UBE2KP61086 200 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 DCDP81605 110 aaKnown RBP6.47□□□□□ -1.37
CTNND1-236ENST00000533667 GAB1Q13480 694 aa6.47□□□□□ -1.37
CTNND1-236ENST00000533667 C18orf63Q68DL7 685 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms