RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 SLC35F4A4IF30 521 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 ADAP00813 363 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 ACADSP16219 412 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 CCNA2P20248 432 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 PTNP21246 168 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 TCEA1P23193 301 aaKnown RBP9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 CXCR1P25024 350 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 ADH6P28332 368 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 CAPGP40121 348 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 OMPP47874 163 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 COMPP49747 757 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 SUCLG1P53597 346 aaKnown RBP9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 DSCR4P56555 118 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 CLDN15P56746 228 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 B3GALT5-AS1P59052 145 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 ADARB1P78563 741 aaKnown RBP9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 PRKCDQ05655 676 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 COX10Q12887 443 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 RAB35Q15286 201 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 SGCBQ16585 318 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 CD300LDQ6UXZ3 194 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 KBTBD8Q8NFY9 601 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 PFN4Q8NHR9 129 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 TMEM234Q8WY98 164 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 ST8SIA1Q92185 356 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 HSD17B8Q92506 261 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 S100PBPQ96BU1 408 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 ZNF426Q9BUY5 554 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 ADI1Q9BV57 179 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 PRRG4Q9BZD6 226 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 RIBC2Q9H4K1 309 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 C12orf10Q9HB07 376 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 MED17Q9NVC6 651 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 FAM118AQ9NWS6 357 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 OSGIN1Q9UJX0 560 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 POFUT2Q9Y2G5 429 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 EXPH5Q8NEV8 1989 aa9.96□□□□□ -0.82
TRAPPC4-213ENST00000533149 TMED7-TICAM2A0A0A6YYA0 188 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 H0YAE9 185 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 KPNA4O00629 521 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 SEC14L5O43304 696 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 DENRO43583 198 aaKnown RBP9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 IFI30P13284 250 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 PRKCAP17252 672 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 CDH2P19022 906 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 MAKP20794 623 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 GSTM3P21266 225 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 GSSP48637 474 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 POLR2HP52434 150 aaKnown RBP9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 BSPH1Q075Z2 132 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 NPRL3Q12980 569 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 TSPAN31Q12999 210 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 CTU2Q2VPK5 515 aaKnown RBP9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 SLC36A3Q495N2 470 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 RAET1LQ5VY80 246 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 TTC23Q5W5X9 447 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 KLHL17Q6TDP4 642 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 GRINAQ7Z429 371 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 ADGRG3Q86Y34 549 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 CDK20Q8IZL9 346 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 ZNF525Q8N782 197 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 C10orf105Q8TEF2 133 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 C1GALT1C1Q96EU7 318 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 FAM46AQ96IP4 442 aaKnown RBP9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 NPAS1Q99742 590 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 USB1Q9BQ65 265 aaKnown RBP9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 TMEM43Q9BTV4 400 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 CACNG6Q9BXT2 260 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 Q9H521 79 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 PTGES2Q9H7Z7 377 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 KRCC1Q9NPI7 259 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 MEPEQ9NQ76 525 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 GLRX2Q9NS18 164 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 C20orf141Q9NUB4 165 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 REV1Q9UBZ9 1251 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 TMED7Q9Y3B3 224 aa9.95□□□□□ -0.82
TRAPPC4-213ENST00000533149 IGKV1D-42A0A075B6H8 117 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 A0A0A6YYJ9 748 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 LOC100130705A0A1B0GUX0 176 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 UNC119BA6NIH7 251 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 H0YC42 278 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 ETV2O00321 342 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 SLC16A6O15403 523 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 SS18L1O75177 396 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 AQP8O94778 261 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 IGFBP1P08833 259 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 OSMP13725 252 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 FPR3P25089 353 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 EPHA2P29317 976 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 HTR3AP46098 478 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 ZNF41P51814 821 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 CRISP1P54107 249 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 TPD52P55327 224 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 ESRRGP62508 458 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 PLPPR5Q32ZL2 321 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 SLC25A53Q5H9E4 307 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 TMPRSS11FQ6ZWK6 438 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 PARP8Q8N3A8 854 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 ZNF555Q8NEP9 628 aa9.94□□□□□ -0.82
TRAPPC4-213ENST00000533149 POC1BQ8TC44 478 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms