RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 H7C417 338 aa26.3■■□□□ 1.8
SSSCA1-207ENST00000533115 SERPINA1P01009 418 aa26.3■■□□□ 1.8
SSSCA1-207ENST00000533115 HLA-HP01893 362 aa26.3■■□□□ 1.8
SSSCA1-207ENST00000533115 YAP1P46937 504 aaKnown RBP26.3■■□□□ 1.8
SSSCA1-207ENST00000533115 NPRL3Q12980 569 aa26.3■■□□□ 1.8
SSSCA1-207ENST00000533115 RAB35Q15286 201 aa26.3■■□□□ 1.8
SSSCA1-207ENST00000533115 IFI44LQ53G44 452 aa26.3■■□□□ 1.8
SSSCA1-207ENST00000533115 OR4F15Q8NGB8 312 aa26.3■■□□□ 1.8
SSSCA1-207ENST00000533115 PMF1-BGLAPU3KQ54 211 aa26.3■■□□□ 1.8
SSSCA1-207ENST00000533115 NSD1Q96L73 2696 aaPredicted RBP26.3■■□□□ 1.8
SSSCA1-207ENST00000533115 A0A1W2PRG6 482 aa26.29■■□□□ 1.8
SSSCA1-207ENST00000533115 SSX4O60224 188 aa26.29■■□□□ 1.8
SSSCA1-207ENST00000533115 F13BP05160 661 aa26.29■■□□□ 1.8
SSSCA1-207ENST00000533115 TSPAN19P0C672 248 aa26.29■■□□□ 1.8
SSSCA1-207ENST00000533115 PGA4P0DJD7 388 aa26.29■■□□□ 1.8
SSSCA1-207ENST00000533115 PGA3P0DJD8 388 aa26.29■■□□□ 1.8
SSSCA1-207ENST00000533115 CD79AP11912 226 aa26.29■■□□□ 1.8
SSSCA1-207ENST00000533115 AQP2P41181 271 aa26.29■■□□□ 1.8
SSSCA1-207ENST00000533115 GNGT1P63211 74 aa26.29■■□□□ 1.8
SSSCA1-207ENST00000533115 GSG1Q2KHT4 349 aa26.29■■□□□ 1.8
SSSCA1-207ENST00000533115 MST1LQ2TV78 715 aa26.29■■□□□ 1.8
SSSCA1-207ENST00000533115 LRFN4Q6PJG9 635 aa26.29■■□□□ 1.8
SSSCA1-207ENST00000533115 OFCC1Q8IZS5 231 aa26.29■■□□□ 1.8
SSSCA1-207ENST00000533115 NANOS1Q8WY41 292 aaKnown RBP26.29■■□□□ 1.8
SSSCA1-207ENST00000533115 FBXO17Q96EF6 278 aa26.29■■□□□ 1.8
SSSCA1-207ENST00000533115 HSH2DQ96JZ2 352 aa26.29■■□□□ 1.8
SSSCA1-207ENST00000533115 FNDC11Q9BVV2 318 aa26.29■■□□□ 1.8
SSSCA1-207ENST00000533115 INIPQ9NRY2 104 aa26.29■■□□□ 1.8
SSSCA1-207ENST00000533115 HTR3EA5X5Y0 456 aa26.28■■□□□ 1.8
SSSCA1-207ENST00000533115 RNF223E7ERA6 249 aa26.28■■□□□ 1.8
SSSCA1-207ENST00000533115 J3KTA2 159 aa26.28■■□□□ 1.8
SSSCA1-207ENST00000533115 PIP5K1CO60331 668 aa26.28■■□□□ 1.8
SSSCA1-207ENST00000533115 IGHG1P01857 330 aa26.28■■□□□ 1.8
SSSCA1-207ENST00000533115 NUDT6P53370 316 aa26.28■■□□□ 1.8
SSSCA1-207ENST00000533115 SWI5Q1ZZU3 235 aa26.28■■□□□ 1.8
SSSCA1-207ENST00000533115 FKBP9P1Q75LS8 142 aa26.28■■□□□ 1.8
SSSCA1-207ENST00000533115 PIWIL3Q7Z3Z3 882 aaKnown RBP26.28■■□□□ 1.8
SSSCA1-207ENST00000533115 FAM162AQ96A26 154 aa26.28■■□□□ 1.8
SSSCA1-207ENST00000533115 POM121Q96HA1 1249 aa26.28■■□□□ 1.8
SSSCA1-207ENST00000533115 SPAG4Q9NPE6 437 aa26.28■■□□□ 1.8
SSSCA1-207ENST00000533115 RHCGQ9UBD6 479 aa26.28■■□□□ 1.8
SSSCA1-207ENST00000533115 IGHV2OR16-5A0A0B4J2B6 119 aa26.27■■□□□ 1.8
SSSCA1-207ENST00000533115 MCIDASD6RGH6 385 aa26.27■■□□□ 1.8
SSSCA1-207ENST00000533115 FFAR1O14842 300 aa26.27■■□□□ 1.8
SSSCA1-207ENST00000533115 NCK1P16333 377 aa26.27■■□□□ 1.8
SSSCA1-207ENST00000533115 HOXB4P17483 251 aaPredicted RBP26.27■■□□□ 1.8
SSSCA1-207ENST00000533115 FUT4P22083 530 aa26.27■■□□□ 1.8
SSSCA1-207ENST00000533115 SERPINF1P36955 418 aa26.27■■□□□ 1.8
SSSCA1-207ENST00000533115 HGFACQ04756 655 aa26.27■■□□□ 1.8
SSSCA1-207ENST00000533115 PIGFQ07326 219 aa26.27■■□□□ 1.8
SSSCA1-207ENST00000533115 NUP37Q8NFH4 326 aa26.27■■□□□ 1.8
SSSCA1-207ENST00000533115 IL17RDQ8NFM7 739 aa26.27■■□□□ 1.8
SSSCA1-207ENST00000533115 MOSPD2Q8NHP6 518 aa26.27■■□□□ 1.8
SSSCA1-207ENST00000533115 HTRA1Q92743 480 aa26.27■■□□□ 1.8
SSSCA1-207ENST00000533115 BPIFA2Q96DR5 249 aa26.27■■□□□ 1.8
SSSCA1-207ENST00000533115 REG4Q9BYZ8 158 aa26.27■■□□□ 1.8
SSSCA1-207ENST00000533115 NOX3Q9HBY0 568 aa26.27■■□□□ 1.8
SSSCA1-207ENST00000533115 MAN2C1Q9NTJ4 1040 aa26.27■■□□□ 1.8
SSSCA1-207ENST00000533115 ZNF224Q9NZL3 707 aa26.27■■□□□ 1.8
SSSCA1-207ENST00000533115 TLN2Q9Y4G6 2542 aa26.26■■□□□ 1.79
SSSCA1-207ENST00000533115 IFI30P13284 250 aa26.26■■□□□ 1.79
SSSCA1-207ENST00000533115 DAP3P51398 398 aaKnown RBP26.26■■□□□ 1.79
SSSCA1-207ENST00000533115 CLRN1P58418 232 aa26.26■■□□□ 1.79
SSSCA1-207ENST00000533115 LSM11P83369 360 aaKnown RBP eCLIP26.26■■□□□ 1.79
SSSCA1-207ENST00000533115 TRAM2Q15035 370 aa26.26■■□□□ 1.79
SSSCA1-207ENST00000533115 ADIPOQQ15848 244 aa26.26■■□□□ 1.79
SSSCA1-207ENST00000533115 VHLLQ6RSH7 139 aa26.26■■□□□ 1.79
SSSCA1-207ENST00000533115 HDDC2Q7Z4H3 204 aa26.26■■□□□ 1.79
SSSCA1-207ENST00000533115 ASB10Q8WXI3 467 aa26.26■■□□□ 1.79
SSSCA1-207ENST00000533115 DENND2DQ9H6A0 471 aaPredicted RBP26.26■■□□□ 1.79
SSSCA1-207ENST00000533115 CSPG4Q6UVK1 2322 aa26.26■■□□□ 1.79
SSSCA1-207ENST00000533115 CENPBD1B2RD01 187 aa26.25■■□□□ 1.79
SSSCA1-207ENST00000533115 DHHO43323 396 aa26.25■■□□□ 1.79
SSSCA1-207ENST00000533115 PDE5AO76074 875 aa26.25■■□□□ 1.79
SSSCA1-207ENST00000533115 QDPRP09417 244 aa26.25■■□□□ 1.79
SSSCA1-207ENST00000533115 RUNX1T1Q06455 604 aa26.25■■□□□ 1.79
SSSCA1-207ENST00000533115 LAPTM4AQ15012 233 aa26.25■■□□□ 1.79
SSSCA1-207ENST00000533115 HIST3H3Q16695 136 aa26.25■■□□□ 1.79
SSSCA1-207ENST00000533115 ZNF75AQ96N20 296 aa26.25■■□□□ 1.79
SSSCA1-207ENST00000533115 MRPL13Q9BYD1 178 aaKnown RBP26.25■■□□□ 1.79
SSSCA1-207ENST00000533115 ADA2Q9NZK5 511 aa26.25■■□□□ 1.79
SSSCA1-207ENST00000533115 EGFL7Q9UHF1 273 aa26.25■■□□□ 1.79
SSSCA1-207ENST00000533115 HIF3AQ9Y2N7 669 aa26.25■■□□□ 1.79
SSSCA1-207ENST00000533115 UBL3O95164 117 aa26.24■■□□□ 1.79
SSSCA1-207ENST00000533115 OR4A8P0C604 315 aa26.24■■□□□ 1.79
SSSCA1-207ENST00000533115 ZNF14P17017 642 aaPredicted RBP26.24■■□□□ 1.79
SSSCA1-207ENST00000533115 SNRPD2P62316 118 aaKnown RBP26.24■■□□□ 1.79
SSSCA1-207ENST00000533115 RAB1AP62820 205 aa26.24■■□□□ 1.79
SSSCA1-207ENST00000533115 PIGWQ7Z7B1 504 aa26.24■■□□□ 1.79
SSSCA1-207ENST00000533115 SKA3Q8IX90 412 aa26.24■■□□□ 1.79
SSSCA1-207ENST00000533115 SLC22A24Q8N4F4 322 aa26.24■■□□□ 1.79
SSSCA1-207ENST00000533115 NOXO1Q8NFA2 376 aa26.24■■□□□ 1.79
SSSCA1-207ENST00000533115 MCHR2Q969V1 340 aa26.24■■□□□ 1.79
SSSCA1-207ENST00000533115 MS4A3Q96HJ5 214 aa26.24■■□□□ 1.79
SSSCA1-207ENST00000533115 ZNF347Q96SE7 839 aa26.24■■□□□ 1.79
SSSCA1-207ENST00000533115 SEPHS2Q99611 448 aa26.24■■□□□ 1.79
SSSCA1-207ENST00000533115 RHNO1Q9BSD3 238 aa26.24■■□□□ 1.79
SSSCA1-207ENST00000533115 ZNF442Q9H7R0 627 aa26.24■■□□□ 1.79
SSSCA1-207ENST00000533115 TMEM38BQ9NVV0 291 aa26.24■■□□□ 1.79
SSSCA1-207ENST00000533115 RPS6KA6Q9UK32 745 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms