RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 CARD18P57730 90 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 NDPQ00604 133 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 MERTKQ12866 999 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 ZNF74Q16587 644 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 SPANXN4Q5MJ08 99 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 LGSNQ5TDP6 509 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 TMEM65Q6PI78 240 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 TMEM108Q6UXF1 575 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 RINLQ6ZS11 566 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 PARP8Q8N3A8 854 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 TCAIMQ8N3R3 496 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 SLC22A24Q8N4F4 322 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 FAM86B1Q8N7N1 296 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 SRFBP1Q8NEF9 429 aaKnown RBP1.32□□□□□ -2.2
KNL1-211ENST00000533001 ZNF596Q8TC21 504 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 CKAP2Q8WWK9 683 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 RAB8BQ92930 207 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 MAL2Q969L2 176 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 MAGOHBQ96A72 148 aaKnown RBP1.32□□□□□ -2.2
KNL1-211ENST00000533001 SH3YL1Q96HL8 342 aaPredicted RBP1.32□□□□□ -2.2
KNL1-211ENST00000533001 KLHL4Q9C0H6 718 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 NAT10Q9H0A0 1025 aaKnown RBP1.32□□□□□ -2.2
KNL1-211ENST00000533001 WDR13Q9H1Z4 485 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 EXO5Q9H790 373 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 MRFAP1Q9Y605 127 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 ZNF816-ZNF321PA0A0X1KG74 233 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 IQANK1A0A1B0GTG1 560 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 FAM90A7PA6NKC0 464 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 FAM90A23PA8MXZ1 464 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 M0R082 166 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 SCAMP2O15127 329 aaKnown RBP1.32□□□□□ -2.2
KNL1-211ENST00000533001 TCN1P20061 433 aaPredicted RBP1.32□□□□□ -2.2
KNL1-211ENST00000533001 EDN2P20800 178 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 MPZP25189 248 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 EIF1P41567 113 aaKnown RBP1.32□□□□□ -2.2
KNL1-211ENST00000533001 MAP2K6P52564 334 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 NUDT6P53370 316 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 IL13RA1P78552 427 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 NFYCQ13952 458 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 CLEC2AQ6UVW9 174 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 C6orf120Q7Z4R8 191 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 LHFPL4Q7Z7J7 247 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 MYO1HQ8N1T3 1032 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 ICA1LQ8NDH6 482 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 C19orf18Q8NEA5 215 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 MFSD8Q8NHS3 518 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 ZNF417Q8TAU3 575 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 FBXO30Q8TB52 745 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 WDR60Q8WVS4 1066 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 LINC00476Q8WZB0 136 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 C17orf77Q96MU5 243 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 ZNF587Q96SQ5 575 aaPredicted RBP1.32□□□□□ -2.2
KNL1-211ENST00000533001 TMEM43Q9BTV4 400 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 THUMPD3Q9BV44 507 aaKnown RBP1.32□□□□□ -2.2
KNL1-211ENST00000533001 SCRT1Q9BWW7 348 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 KRTAP1-5Q9BYS1 174 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 REEP4Q9H6H4 257 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 TBCCD1Q9NVR7 557 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 PAQR5Q9NXK6 330 aaPredicted RBP1.32□□□□□ -2.2
KNL1-211ENST00000533001 POLR3HQ9Y535 204 aaPredicted RBP1.32□□□□□ -2.2
KNL1-211ENST00000533001 CLGNO14967 610 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 ETFAP13804 333 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 TACR3P29371 465 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 CRIP2P52943 208 aaPredicted RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 UCP2P55851 309 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 EXOC3L2Q2M3D2 409 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 CFAP77Q6ZQR2 320 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 Q6ZRN7 208 aaPredicted RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 C1orf122Q6ZSJ8 110 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 KRTAP19-1Q8IUB9 90 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 WDR75Q8IWA0 830 aaKnown RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 OR4P4Q8NGL7 312 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 OR8D4Q8NGM9 314 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 OR6X1Q8NH79 312 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 KIF18AQ8NI77 898 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 HAVCR1Q96D42 359 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 ZNF583Q96ND8 569 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 ALS2CR12Q96Q35 445 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 TSGA10Q9BZW7 698 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 LPAR2Q9HBW0 351 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 DDX28Q9NUL7 540 aaKnown RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 ANAPC5Q9UJX4 755 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 A0A1B0GWA3 101 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 TP53I11O14683 189 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 TRAPPC6AO75865 159 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 TXNDC12O95881 172 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 GKN3PP0CG01 181 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 GATA3P23771 443 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 CASP6P55212 293 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 PPP2R2BQ00005 443 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 ROR2Q01974 943 aaKnown RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 RGS1Q08116 209 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 EFR3AQ14156 821 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 DIAPH2-AS1Q14236 149 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 HLXQ14774 488 aaPredicted RBP1.31□□□□□ -2.2
KNL1-211ENST00000533001 AANATQ16613 207 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 MESTQ5EB52 335 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 MROH9Q5TGP6 573 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 ZNF836Q6ZNA1 936 aa1.31□□□□□ -2.2
KNL1-211ENST00000533001 NKAIN4Q8IVV8 208 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms