RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 TEX12Q9BXU0 123 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 PRRG3Q9BZD7 231 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 PLA2G12AQ9BZM1 189 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 PIGMQ9H3S5 423 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 EGLN3Q9H6Z9 239 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 SMPD3Q9NY59 655 aaPredicted RBP11.09□□□□□ -0.63
COPB1-208ENST00000532088 GRHPRQ9UBQ7 328 aa11.09□□□□□ -0.63
COPB1-208ENST00000532088 TMEM238LA0A1B0GVL6 79 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 ZAR1LA6NP61 321 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 MITFO75030 526 aaPredicted RBP11.08□□□□□ -0.64
COPB1-208ENST00000532088 SOX14O95416 240 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 HMGN1P05114 100 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 CD8BP10966 210 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 IFNGR1P15260 489 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 AGAP20933 346 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 OR3A2P47893 321 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 PTDSS1P48651 473 aaKnown RBP11.08□□□□□ -0.64
COPB1-208ENST00000532088 PCYT1AP49585 367 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 GSK3AP49840 483 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 CLDN17P56750 224 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 TAGLNQ01995 201 aaKnown RBP11.08□□□□□ -0.64
COPB1-208ENST00000532088 PGGHGQ32M88 737 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 PLXDC2Q6UX71 529 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 AAED1Q7RTV5 226 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 TMEM123Q8N131 208 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 NRG4Q8WWG1 115 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 ASB5Q8WWX0 329 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 SLC25A44Q96H78 314 aaPredicted RBP11.08□□□□□ -0.64
COPB1-208ENST00000532088 ZNF570Q96NI8 536 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 ZNF385AQ96PM9 386 aaKnown RBP11.08□□□□□ -0.64
COPB1-208ENST00000532088 TSPAN32Q96QS1 320 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 ALG12Q9BV10 488 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 IFT27Q9BW83 186 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 LINC00470Q9BZP3 86 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 ENKD1Q9H0I2 346 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 SRA1Q9HD15 236 aaKnown RBP11.08□□□□□ -0.64
COPB1-208ENST00000532088 PLSCR4Q9NRQ2 329 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 KLHL21Q9UJP4 597 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 ZNF346Q9UL40 294 aaKnown RBP11.08□□□□□ -0.64
COPB1-208ENST00000532088 DOCK7Q96N67 2140 aa11.08□□□□□ -0.64
COPB1-208ENST00000532088 ZFYVE26Q68DK2 2539 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 A0A0G2JNJ9 132 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 ZNF726A6NNF4 738 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 DLGAP1O14490 977 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 SLC16A6O15403 523 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 SLC43A1O75387 559 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 PPP1R3DO95685 299 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 CGAP01215 116 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 IGHG1P01857 330 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 ACADSP16219 412 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 VHLP40337 213 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 UQCRFS1P47985 274 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 ZNF133P52736 654 aaPredicted RBP11.07□□□□□ -0.64
COPB1-208ENST00000532088 BIDP55957 195 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 ERVK-25P63136 954 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 KRR1Q13601 381 aaKnown RBP11.07□□□□□ -0.64
COPB1-208ENST00000532088 GINS1Q14691 196 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 PTGES3Q15185 160 aaKnown RBP11.07□□□□□ -0.64
COPB1-208ENST00000532088 HIST3H3Q16695 136 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 LRRC36Q1X8D7 754 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 SLX4IPQ5VYV7 408 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 FBXW10Q5XX13 1052 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 C3P1Q6ZMU1 363 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 IGFN1Q86VF2 1251 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 GCNT2Q8N0V5 402 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 POMGNT2Q8NAT1 580 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 NAXEQ8NCW5 288 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 OR4Q3Q8NH05 313 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 ZNF566Q969W8 418 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 APH1AQ96BI3 265 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 STARD4Q96DR4 205 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 HRASLS5Q96KN8 279 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 ERMAPQ96PL5 475 aaPredicted RBP11.07□□□□□ -0.64
COPB1-208ENST00000532088 OR2M2Q96R28 347 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 PITX2Q99697 317 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 MRPL13Q9BYD1 178 aaKnown RBP11.07□□□□□ -0.64
COPB1-208ENST00000532088 TOR3AQ9H497 397 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 CMC2Q9NRP2 79 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 MED29Q9NX70 200 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 COQ3Q9NZJ6 369 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 Q9UFV3 132 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 SH3BGRL2Q9UJC5 107 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 CLEC4AQ9UMR7 237 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 SLC5A6Q9Y289 635 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 IER3IP1Q9Y5U9 82 aa11.07□□□□□ -0.64
COPB1-208ENST00000532088 XKRYO14609 159 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 DVL2O14641 736 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 MSTNO14793 375 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 LRRTM2O43300 516 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 TRMUO75648 421 aaKnown RBP11.06□□□□□ -0.64
COPB1-208ENST00000532088 IFNGP01579 166 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 IGFBP1P08833 259 aaPredicted RBP11.06□□□□□ -0.64
COPB1-208ENST00000532088 PGA4P0DJD7 388 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 PGA3P0DJD8 388 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 POU1F1P28069 291 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 NOS3P29474 1203 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 CHRNB4P30926 498 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 NTF4P34130 210 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 HSPA13P48723 471 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 ADORA2A-AS1P86434 159 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms