RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 SLC25A22Q9H936 323 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 UGT1A7Q9HAW7 530 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 UGT1A8Q9HAW9 530 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 TMEM165Q9HC07 324 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 MRPS30Q9NP92 439 aaKnown RBP2.1□□□□□ -2.07
CD44-234ENST00000531873 IL26Q9NPH9 171 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 RPRD1BQ9NQG5 326 aaKnown RBP2.1□□□□□ -2.07
CD44-234ENST00000531873 CCL28Q9NRJ3 127 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 PLSCR3Q9NRY6 295 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 AHSPQ9NZD4 102 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 N6AMT1Q9Y5N5 214 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 CDH10Q9Y6N8 788 aa2.1□□□□□ -2.07
CD44-234ENST00000531873 ADAMTS9Q9P2N4 1935 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 MTCL1Q9Y4B5 1905 aaKnown RBP2.09□□□□□ -2.07
CD44-234ENST00000531873 IGKV3D-20A0A0C4DH25 116 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 A0A1B0GTQ1 180 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 LRRIQ3A6PVS8 624 aaPredicted RBP2.09□□□□□ -2.07
CD44-234ENST00000531873 TMEM110-MUSTN1A8MSY1 372 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 SUPT3HB4E1H0 165 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 E7ENQ6 273 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 SIRPB1O00241 398 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 HDAC3O15379 428 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 TRAF3IP2O43734 574 aaPredicted RBP2.09□□□□□ -2.07
CD44-234ENST00000531873 MGRN1O60291 552 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 FAM189A1O60320 539 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 EEDO75530 441 aaKnown RBP2.09□□□□□ -2.07
CD44-234ENST00000531873 EIF3GO75821 320 aaKnown RBP eCLIP2.09□□□□□ -2.07
CD44-234ENST00000531873 MMP23AO75900 390 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 SUPT7LO94864 414 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 ERLIN2O94905 339 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 MOSP00540 346 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 KLK2P20151 261 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 ZBTB25P24278 435 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 FMO3P31513 532 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 RBMXP38159 391 aaKnown RBP2.09□□□□□ -2.07
CD44-234ENST00000531873 SSR4P51571 173 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 CAV2P51636 162 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 CRISP1P54107 249 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 FGF8P55075 233 aaPredicted RBP2.09□□□□□ -2.07
CD44-234ENST00000531873 STX17P56962 302 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 EIF3EP60228 445 aaKnown RBP2.09□□□□□ -2.07
CD44-234ENST00000531873 YWHAGP61981 247 aaKnown RBP eCLIP2.09□□□□□ -2.07
CD44-234ENST00000531873 ZNF92Q03936 586 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 REG3AQ06141 175 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 ZNF630Q2M218 657 aaPredicted RBP2.09□□□□□ -2.07
CD44-234ENST00000531873 RNF212Q495C1 297 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 CCDC14Q49A88 953 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 CAVIN4Q5BKX8 364 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 PPM1LQ5SGD2 360 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 PIP5KL1Q5T9C9 394 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 CNIH2Q6PI25 160 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 THOC6Q86W42 341 aaKnown RBP2.09□□□□□ -2.07
CD44-234ENST00000531873 PNKDQ8N490 385 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 EID2Q8N6I1 236 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 C20orf203Q8NBC4 194 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 OR5B3Q8NH48 314 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 MARCH1Q8TCQ1 289 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 ANKRD49Q8WVL7 239 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 FRAT1Q92837 279 aaPredicted RBP2.09□□□□□ -2.07
CD44-234ENST00000531873 STMN2Q93045 179 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 TMEM101Q96IK0 257 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 PRRC1Q96M27 445 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 BCL7BQ9BQE9 202 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 HES7Q9BYE0 225 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 DNTTIP1Q9H147 329 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 ELOVL6Q9H5J4 265 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 SIAEQ9HAT2 523 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 MRPL47Q9HD33 250 aaKnown RBP2.09□□□□□ -2.07
CD44-234ENST00000531873 LYRM4Q9HD34 91 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 LYARQ9NX58 379 aaKnown RBP2.09□□□□□ -2.07
CD44-234ENST00000531873 MTRF1LQ9UGC7 380 aaKnown RBP2.09□□□□□ -2.07
CD44-234ENST00000531873 ING4Q9UNL4 249 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 CHTOPQ9Y3Y2 248 aaKnown RBP2.09□□□□□ -2.07
CD44-234ENST00000531873 MMP24Q9Y5R2 645 aa2.09□□□□□ -2.07
CD44-234ENST00000531873 SYNRGQ9UMZ2 1314 aa2.09□□□□□ -2.08
CD44-234ENST00000531873 LRP4O75096 1905 aa2.09□□□□□ -2.08
CD44-234ENST00000531873 USP47Q96K76 1375 aa2.09□□□□□ -2.08
CD44-234ENST00000531873 ERCC6Q03468 1493 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 SMCO2A6NFE2 343 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 C12orf71A8MTZ7 269 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 A8MUA0 341 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 SPECC1L-ADORA2AF8WAN1 911 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 GOLGA8TH3BQL2 631 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 CDC7O00311 574 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 NDUFAB1O14561 156 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 AIM2O14862 343 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 CLIC3O95833 236 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 RALBP11234 206 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 ICAM2P13598 275 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 FUT3P21217 361 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 GSTM3P21266 225 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 BCKDHBP21953 392 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 SLC2A5P22732 501 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 GTF2E2P29084 291 aaKnown RBP2.08□□□□□ -2.08
CD44-234ENST00000531873 SLC1A1P43005 524 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 CDKN1BP46527 198 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 UQCRFS1P47985 274 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 RFX3P48380 749 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 SLC11A1P49279 550 aa2.08□□□□□ -2.08
CD44-234ENST00000531873 RORCP51449 518 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms