RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 TSPEARQ8WU66 669 aa13.61□□□□□ -0.23
CPSF1-205ENST00000531042 TMEM54Q969K7 222 aa13.61□□□□□ -0.23
CPSF1-205ENST00000531042 MRPL24Q96A35 216 aaKnown RBP13.61□□□□□ -0.23
CPSF1-205ENST00000531042 DENND2DQ9H6A0 471 aaPredicted RBP13.61□□□□□ -0.23
CPSF1-205ENST00000531042 TAS2R5Q9NYW4 299 aa13.61□□□□□ -0.23
CPSF1-205ENST00000531042 TRIM33Q9UPN9 1127 aa13.61□□□□□ -0.23
CPSF1-205ENST00000531042 SPEF1Q9Y4P9 236 aa13.61□□□□□ -0.23
CPSF1-205ENST00000531042 LRP5LA4QPB2 252 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 HMGB1P1B2RPK0 211 aaPredicted RBP13.6□□□□□ -0.23
CPSF1-205ENST00000531042 RAB36O95755 333 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 CH25HO95992 272 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 TGFAP01135 160 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 TACSTD2P09758 323 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 SRD5A1P18405 259 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 PCGF2P35227 344 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 GLRXP35754 106 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 GIPRP48546 466 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 EVX1P49640 407 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 NFYCQ13952 458 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 SLC35D2Q76EJ3 337 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 PIWIL3Q7Z3Z3 882 aaKnown RBP13.6□□□□□ -0.23
CPSF1-205ENST00000531042 TSPYL5Q86VY4 417 aaPredicted RBP13.6□□□□□ -0.23
CPSF1-205ENST00000531042 SKA3Q8IX90 412 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 OR10A6Q8NH74 314 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 OR6X1Q8NH79 312 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 UBASH3BQ8TF42 649 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 TAMM41Q96BW9 452 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 ZNF426Q9BUY5 554 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 MRPL37Q9BZE1 423 aaKnown RBP13.6□□□□□ -0.23
CPSF1-205ENST00000531042 PCDHAC1Q9H158 963 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 TPK1Q9H3S4 243 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 NANSQ9NR45 359 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 GLTPQ9NZD2 209 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 SLC7A7Q9UM01 511 aa13.6□□□□□ -0.23
CPSF1-205ENST00000531042 TRAPPC13A5PLN9 417 aa13.59□□□□□ -0.23
CPSF1-205ENST00000531042 SYNGR3O43761 229 aa13.59□□□□□ -0.23
CPSF1-205ENST00000531042 LILRA1O75019 489 aa13.59□□□□□ -0.23
CPSF1-205ENST00000531042 UBL3O95164 117 aa13.59□□□□□ -0.23
CPSF1-205ENST00000531042 GZMMP51124 257 aa13.59□□□□□ -0.23
CPSF1-205ENST00000531042 CHN2P52757 468 aa13.59□□□□□ -0.23
CPSF1-205ENST00000531042 RIN1Q13671 783 aa13.59□□□□□ -0.23
CPSF1-205ENST00000531042 RAB39AQ14964 217 aa13.59□□□□□ -0.23
CPSF1-205ENST00000531042 FXNQ16595 210 aa13.59□□□□□ -0.23
CPSF1-205ENST00000531042 INTS11Q5TA45 600 aaKnown RBP13.59□□□□□ -0.23
CPSF1-205ENST00000531042 LRRC17Q8N6Y2 441 aa13.59□□□□□ -0.23
CPSF1-205ENST00000531042 FGFBP3Q8TAT2 258 aa13.59□□□□□ -0.23
CPSF1-205ENST00000531042 SLC26A7Q8TE54 656 aa13.59□□□□□ -0.23
CPSF1-205ENST00000531042 HPS1Q92902 700 aa13.59□□□□□ -0.23
CPSF1-205ENST00000531042 SLC25A44Q96H78 314 aaPredicted RBP13.59□□□□□ -0.23
CPSF1-205ENST00000531042 MPP4Q96JB8 637 aa13.59□□□□□ -0.23
CPSF1-205ENST00000531042 SLC19A3Q9BZV2 496 aa13.59□□□□□ -0.23
CPSF1-205ENST00000531042 NPHS2Q9NP85 383 aa13.59□□□□□ -0.23
CPSF1-205ENST00000531042 ZNF229Q9UJW7 825 aa13.59□□□□□ -0.23
CPSF1-205ENST00000531042 FBXL3Q9UKT7 428 aa13.59□□□□□ -0.23
CPSF1-205ENST00000531042 LYNX1G3V0Z9 82 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 KPNA4O00629 521 aaPredicted RBP13.58□□□□□ -0.24
CPSF1-205ENST00000531042 DYNC1I1O14576 645 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 RNF13O43567 381 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 EDF1O60869 148 aaKnown RBP13.58□□□□□ -0.24
CPSF1-205ENST00000531042 ASAH2BP0C7U1 165 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 PATE4P0C8F1 98 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 LYNX1P0DP58 116 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 HNF1AP20823 631 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 IL2RGP31785 369 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 CRYBA2P53672 197 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 GALK2Q01415 458 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 MELKQ14680 651 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 VMACQ2NL98 169 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 KRTAP24-1Q3LI83 254 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 GKAP1Q5VSY0 366 aaPredicted RBP13.58□□□□□ -0.24
CPSF1-205ENST00000531042 METTL21CQ5VZV1 264 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 LRFN4Q6PJG9 635 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 CCDC80Q76M96 950 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 ZNF584Q8IVC4 421 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 SLC22A24Q8N4F4 322 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 ZNF566Q969W8 418 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 PRSS27Q9BQR3 290 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 SIKE1Q9BRV8 207 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 MS4A5Q9H3V2 200 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 REV1Q9UBZ9 1251 aa13.58□□□□□ -0.24
CPSF1-205ENST00000531042 A0A0G2JND7 137 aa13.57□□□□□ -0.24
CPSF1-205ENST00000531042 M0R233 179 aa13.57□□□□□ -0.24
CPSF1-205ENST00000531042 FBP2O00757 339 aa13.57□□□□□ -0.24
CPSF1-205ENST00000531042 HIST1H2ABP04908 130 aa13.57□□□□□ -0.24
CPSF1-205ENST00000531042 SERPINA5P05154 406 aa13.57□□□□□ -0.24
CPSF1-205ENST00000531042 PGA4P0DJD7 388 aa13.57□□□□□ -0.24
CPSF1-205ENST00000531042 PGA3P0DJD8 388 aa13.57□□□□□ -0.24
CPSF1-205ENST00000531042 OR8G3PP0DMU2 310 aa13.57□□□□□ -0.24
CPSF1-205ENST00000531042 APEX1P27695 318 aaKnown RBP13.57□□□□□ -0.24
CPSF1-205ENST00000531042 RPS23P62266 143 aaKnown RBP13.57□□□□□ -0.24
CPSF1-205ENST00000531042 TRIP10Q15642 601 aa13.57□□□□□ -0.24
CPSF1-205ENST00000531042 CR1LQ2VPA4 569 aa13.57□□□□□ -0.24
CPSF1-205ENST00000531042 NANOGP8Q6NSW7 305 aa13.57□□□□□ -0.24
CPSF1-205ENST00000531042 HIST3H2AQ7L7L0 130 aa13.57□□□□□ -0.24
CPSF1-205ENST00000531042 HDXQ7Z353 690 aa13.57□□□□□ -0.24
CPSF1-205ENST00000531042 LRP11Q86VZ4 500 aa13.57□□□□□ -0.24
CPSF1-205ENST00000531042 RASSF5Q8WWW0 418 aa13.57□□□□□ -0.24
CPSF1-205ENST00000531042 HIST1H2ACQ93077 130 aa13.57□□□□□ -0.24
CPSF1-205ENST00000531042 SNX18Q96RF0 628 aa13.57□□□□□ -0.24
CPSF1-205ENST00000531042 SH3GL3Q99963 347 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms