RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 RPL13AP40429 203 aaKnown RBP2.74□□□□□ -1.97
CTR9-204ENST00000529355 NMUP48645 174 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 SULT1E1P49888 294 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 IDI1Q13907 227 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 GGTLC2Q14390 218 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 STK38Q15208 465 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 NDUFA5Q16718 116 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 SFT2D3Q587I9 215 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 AADACL4Q5VUY2 407 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 PPP1R42Q7Z4L9 355 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 OR4F15Q8NGB8 312 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 OR8K3Q8NH51 312 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 DTX3LQ8TDB6 740 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 CNDP1Q96KN2 507 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 ATP6V1G3Q96LB4 118 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 NT5C3AQ9H0P0 336 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 DNTTIP1Q9H147 329 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 SLCO1B3Q9NPD5 702 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 SLC39A1Q9NY26 324 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 STOX2Q9P2F5 926 aaPredicted RBP2.74□□□□□ -1.97
CTR9-204ENST00000529355 EXTL2Q9UBQ6 330 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 CLEC4AQ9UMR7 237 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 PDS5BQ9NTI5 1447 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 TNIKQ9UKE5 1360 aa2.74□□□□□ -1.97
CTR9-204ENST00000529355 IGKV2D-24A0A075B6R9 120 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 LRRIQ3A6PVS8 624 aaPredicted RBP2.73□□□□□ -1.97
CTR9-204ENST00000529355 A8MXQ7 604 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 L7N2F9 121 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 MAGEB4O15481 346 aaPredicted RBP2.73□□□□□ -1.97
CTR9-204ENST00000529355 POLR2DO15514 142 aaKnown RBP2.73□□□□□ -1.97
CTR9-204ENST00000529355 ZNF324O75467 553 aaPredicted RBP2.73□□□□□ -1.97
CTR9-204ENST00000529355 SUPT3HO75486 399 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 OR5F1O95221 314 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 NPPAP01160 153 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 ZNF44P15621 663 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 CNR1P21554 472 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 IL32P24001 234 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 PBLDP30039 288 aaPredicted RBP2.73□□□□□ -1.97
CTR9-204ENST00000529355 CCR1P32246 355 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 RPS9P46781 194 aaKnown RBP2.73□□□□□ -1.97
CTR9-204ENST00000529355 HAAOP46952 286 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 ATP5OP48047 213 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 IFNAR2P48551 515 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 DUSP3P51452 185 aaPredicted RBP2.73□□□□□ -1.97
CTR9-204ENST00000529355 SUCLG1P53597 346 aaKnown RBP2.73□□□□□ -1.97
CTR9-204ENST00000529355 ATP1B3P54709 279 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 MAP3K7CLP57077 242 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 UBE2HP62256 183 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 CDK16Q00536 496 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 SPAG1Q07617 926 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 FZD2Q14332 565 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 GUCA2BQ16661 112 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 CEP55Q53EZ4 464 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 LRRC10Q5BKY1 277 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 PIGGQ5H8A4 983 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 TMEM53Q6P2H8 277 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 CCDC121Q6ZUS5 278 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 NKAIN4Q8IVV8 208 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 C12orf56Q8IXR9 622 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 FAM9CQ8IZT9 166 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 ZNF540Q8NDQ6 660 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 OR6X1Q8NH79 312 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 ZNF596Q8TC21 504 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 SCFD1Q8WVM8 642 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 IFT81Q8WYA0 676 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 KIFAP3Q92845 792 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 RIOK1Q9BRS2 568 aaKnown RBP2.73□□□□□ -1.97
CTR9-204ENST00000529355 PARD6BQ9BYG5 372 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 SLC17A9Q9BYT1 436 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 DRC3Q9H069 523 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 C12orf10Q9HB07 376 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 FANCEQ9HB96 536 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 LY9Q9HBG7 655 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 KCNIP1Q9NZI2 227 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 TBX21Q9UL17 535 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 KCNIP3Q9Y2W7 256 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 PNPLA6Q8IY17 1366 aa2.73□□□□□ -1.97
CTR9-204ENST00000529355 ELP1O95163 1332 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 IGLV4-69A0A075B6H9 119 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 LOC100653049A0A140TA62 436 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 LRRIQ4A6NIV6 560 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 SPECC1L-ADORA2AF8WAN1 911 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 DLGAP1O14490 977 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 MED7O43513 233 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 CRTAPO75718 401 aaPredicted RBP2.72□□□□□ -1.97
CTR9-204ENST00000529355 KRT34O76011 436 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 KRT14P02533 472 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 PNMA6AP0CW24 399 aaPredicted RBP2.72□□□□□ -1.97
CTR9-204ENST00000529355 LONP1P36776 959 aaKnown RBP2.72□□□□□ -1.97
CTR9-204ENST00000529355 CXCL5P42830 114 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 SERPINB8P50452 374 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 ZNF136P52737 540 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 PLTPP55058 493 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 FGF8P55075 233 aaPredicted RBP2.72□□□□□ -1.97
CTR9-204ENST00000529355 S100A12P80511 92 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 OR5I1Q13606 314 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 GNA13Q14344 377 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 MESDQ14696 234 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 DPYSL2Q16555 572 aa2.72□□□□□ -1.97
CTR9-204ENST00000529355 Q3ZCU0 254 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms