RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 CRYGBP07316 175 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 HCKP08631 526 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 FCGR3AP08637 254 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 ZDHHC11BP0C7U3 371 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 LINC00614P0C842 121 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 RNH1P13489 461 aaKnown RBP2.73□□□□□ -1.97
CD44-229ENST00000528672 SELEP16581 610 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 TPSB2P20231 275 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 GSTM3P21266 225 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 TBXA2RP21731 343 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 S100PP25815 95 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 LAP3P28838 519 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 PPP2R1BP30154 601 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 GPX4P36969 197 aaPredicted RBP2.73□□□□□ -1.97
CD44-229ENST00000528672 TALDO1P37837 337 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 C21orf59P57076 290 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 SEC61GP60059 68 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 CHRNB3Q05901 458 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 RGS1Q08116 209 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 MGAT3Q09327 533 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 ELAVL3Q14576 367 aaKnown RBP2.73□□□□□ -1.97
CD44-229ENST00000528672 GANABQ14697 944 aaKnown RBP2.73□□□□□ -1.97
CD44-229ENST00000528672 TPSAB1Q15661 275 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 TOMM34Q15785 309 aaPredicted RBP2.73□□□□□ -1.97
CD44-229ENST00000528672 GUK1Q16774 197 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 IMPG1Q17R60 797 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 C5orf47Q569G3 176 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 MUC21Q5SSG8 566 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 MEDAGQ5VYS4 303 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 FRMPD2BQ6IN97 320 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 ZFP1Q6P2D0 407 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 CD300LGQ6UXG3 332 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 GSG1LQ6UXU4 331 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 CERS6Q6ZMG9 384 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 CYS1Q717R9 158 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 ARCQ7LC44 396 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 SNX20Q7Z614 316 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 SETD3Q86TU7 594 aaPredicted RBP2.73□□□□□ -1.97
CD44-229ENST00000528672 HORMAD1Q86X24 394 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 PHF13Q86YI8 300 aaPredicted RBP2.73□□□□□ -1.97
CD44-229ENST00000528672 CCDC71Q8IV32 467 aaPredicted RBP2.73□□□□□ -1.97
CD44-229ENST00000528672 ZBED8Q8IZ13 594 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 ACBD4Q8NC06 268 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 OR2L5Q8NG80 312 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 OR10A7Q8NGE5 316 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 OR51L1Q8NGJ5 315 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 OR2L8Q8NGY9 312 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 ZNF519Q8TB69 540 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 CNIH3Q8TBE1 160 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 FAM222BQ8WU58 562 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 C22orf15Q8WYQ4 148 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 FAM3CQ92520 227 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 AP3S1Q92572 193 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 NRGNQ92686 78 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 SLC38A4Q969I6 547 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 PSMG2Q969U7 264 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 TAMM41Q96BW9 452 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 DNAJA3Q96EY1 480 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 SDSLQ96GA7 329 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 MRPL48Q96GC5 212 aaKnown RBP2.73□□□□□ -1.97
CD44-229ENST00000528672 ATXN7L3BQ96GX2 97 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 FAM210BQ96KR6 192 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 PRAP1Q96NZ9 151 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 XPO6Q96QU8 1125 aaKnown RBP2.73□□□□□ -1.97
CD44-229ENST00000528672 C12orf57Q99622 126 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 SYT15Q9BQS2 421 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 COPS4Q9BT78 406 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 TIPINQ9BVW5 301 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 TEKT3Q9BXF9 490 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 WDR13Q9H1Z4 485 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 RANBP3Q9H6Z4 567 aaPredicted RBP2.73□□□□□ -1.97
CD44-229ENST00000528672 ADGRL4Q9HBW9 690 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 ESM1Q9NQ30 184 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 TIGARQ9NQ88 270 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 OR2S2Q9NQN1 319 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 ABCC13Q9NSE7 274 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 TAS2R9Q9NYW1 312 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 BTNL2Q9UIR0 455 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 ANAPC7Q9UJX3 599 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 NDRG2Q9UN36 371 aaKnown RBP2.73□□□□□ -1.97
CD44-229ENST00000528672 MRPS28Q9Y2Q9 187 aaKnown RBP2.73□□□□□ -1.97
CD44-229ENST00000528672 NDUFAF1Q9Y375 327 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 PRELID3BQ9Y3B1 194 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 FBXO7Q9Y3I1 522 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 L3MBTL1Q9Y468 752 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 USH1CQ9Y6N9 552 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 UNC79Q9P2D8 2635 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 WDR7Q9Y4E6 1490 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 A0A087X002 238 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 IGHV3-38A0A0C4DH36 116 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 A0A1B0GV90 55 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 A0A1W2PQL4 384 aaPredicted RBP2.72□□□□□ -1.97
CD44-229ENST00000528672 MEIOCA2RUB1 952 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 EFCAB7A8K855 629 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 ZNF487B1APH4 448 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 NPIPA7E9PJI5 369 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 M0QZK8 103 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 TXNDC9O14530 226 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 OR7A17O14581 309 aa2.72□□□□□ -1.97
CD44-229ENST00000528672 B4GALT5O43286 388 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms