RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 DERL2Q9GZP9 239 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 SAV1Q9H4B6 383 aaPredicted RBP4.67□□□□□ -1.66
PCF11-202ENST00000528336 PLEK2Q9NYT0 353 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 SLC17A7Q9P2U7 560 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 SCML1Q9UN30 329 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 NPIPA1Q9UND3 350 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 FLVCR2Q9UPI3 526 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 OR1A2Q9Y585 309 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 COL2A1P02458 1487 aaPredicted RBP4.67□□□□□ -1.66
PCF11-202ENST00000528336 DOCK2Q92608 1830 aa4.67□□□□□ -1.66
PCF11-202ENST00000528336 CCT8L1PA6NM43 557 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 CYB561D2O14569 222 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 GPR171O14626 319 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 TOR1AO14656 332 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 GMDSO60547 372 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 OR2J3O76001 311 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 ERLIN2O94905 339 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 CST4P01036 141 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 IGF1P05019 195 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 SERPINA6P08185 405 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 HSMCR30P0CW71 290 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 ZNF43P17038 809 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 HOXB8P17481 243 aaPredicted RBP4.66□□□□□ -1.66
PCF11-202ENST00000528336 PGCP20142 388 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 GPX3P22352 226 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 GTF2E2P29084 291 aaKnown RBP4.66□□□□□ -1.66
PCF11-202ENST00000528336 GNA11P29992 359 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 HMOX2P30519 316 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 CFHR2P36980 270 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 PPP1R2P41236 205 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 SLC1A4P43007 532 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 P2RY1P47900 373 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 ATP4BP51164 291 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 NOVA1P51513 510 aaKnown RBP4.66□□□□□ -1.66
PCF11-202ENST00000528336 SGSHP51688 502 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 RAB10P61026 200 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 DYNLL1P63167 89 aaKnown RBP4.66□□□□□ -1.66
PCF11-202ENST00000528336 MRPS6P82932 125 aaKnown RBP4.66□□□□□ -1.66
PCF11-202ENST00000528336 EWSR1Q01844 656 aaKnown RBP eCLIP4.66□□□□□ -1.66
PCF11-202ENST00000528336 TCP10Q12799 353 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 CEACAM7Q14002 265 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 MLF2Q15773 248 aaPredicted RBP4.66□□□□□ -1.66
PCF11-202ENST00000528336 KYAT1Q16773 422 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 UPP1Q16831 310 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 KNOP1Q1ED39 458 aaKnown RBP4.66□□□□□ -1.66
PCF11-202ENST00000528336 CELF3Q5SZQ8 465 aaKnown RBP4.66□□□□□ -1.66
PCF11-202ENST00000528336 TIGD3Q6B0B8 471 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 DMKNQ6E0U4 476 aaPredicted RBP4.66□□□□□ -1.66
PCF11-202ENST00000528336 KRTAP5-11Q6L8G4 156 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 PPP1R2P3Q6NXS1 205 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 LEG1Q6P5S2 330 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 ULK3Q6PHR2 472 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 ZNF562Q6V9R5 426 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 PID1Q7Z2X4 250 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 HDDC2Q7Z4H3 204 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 P4HA3Q7Z4N8 544 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 NET1Q7Z628 596 aaPredicted RBP4.66□□□□□ -1.66
PCF11-202ENST00000528336 C17orf64Q86WR6 236 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 LYG1Q8N1E2 194 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 OR1L6Q8NGR2 347 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 OR13C5Q8NGS8 318 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 ING5Q8WYH8 240 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 GTF2H4Q92759 462 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 TUBGCP2Q9BSJ2 902 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 CNPY3Q9BT09 278 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 RACGAP1Q9H0H5 632 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 ANKRD19PQ9H560 264 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 FNDC4Q9H6D8 234 aaPredicted RBP4.66□□□□□ -1.66
PCF11-202ENST00000528336 VIPAS39Q9H9C1 493 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 NTN4Q9HB63 628 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 C1orf123Q9NWV4 160 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 ELOVL2Q9NXB9 296 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 CSAG2Q9Y5P2 127 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 KPTNQ9Y664 436 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 GRIN2DO15399 1336 aa4.66□□□□□ -1.66
PCF11-202ENST00000528336 A0A0D9SFI3 127 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 PDHXO00330 501 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 TAPBPO15533 448 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 B4GAT1O43505 415 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 CHST1O43916 411 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 OR10H3O60404 316 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 SLC35G4P0C7Q5 338 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 GSTT2P0CG29 244 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 GSTT2BP0CG30 244 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 UBCP0CG48 685 aaKnown RBP4.65□□□□□ -1.67
PCF11-202ENST00000528336 CD1DP15813 335 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 GLRA1P23415 457 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 CDC34P49427 236 aaPredicted RBP4.65□□□□□ -1.67
PCF11-202ENST00000528336 GDI2P50395 445 aaKnown RBP4.65□□□□□ -1.67
PCF11-202ENST00000528336 UCNP55089 124 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 C1QTNF8P60827 252 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 ABCE1P61221 599 aaKnown RBP4.65□□□□□ -1.67
PCF11-202ENST00000528336 POLR2GP62487 172 aaKnown RBP eCLIP4.65□□□□□ -1.67
PCF11-202ENST00000528336 TFDP1Q14186 410 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 CASP8Q14790 479 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 RNLSQ5VYX0 342 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 PLPP4Q5VZY2 271 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 CST9Q5W186 159 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 STUMQ69YW2 141 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 C1orf94Q6P1W5 598 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms