RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 HOXB1P14653 301 aaPredicted RBP9.23□□□□□ -0.93
CD44-227ENST00000528086 B4GALT1P15291 398 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 ZNF14P17017 642 aaPredicted RBP9.23□□□□□ -0.93
CD44-227ENST00000528086 MSX2P35548 267 aaPredicted RBP9.23□□□□□ -0.93
CD44-227ENST00000528086 FABP6P51161 128 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 IDH3GP51553 393 aaPredicted RBP9.23□□□□□ -0.93
CD44-227ENST00000528086 ZNF133P52736 654 aaPredicted RBP9.23□□□□□ -0.93
CD44-227ENST00000528086 TAS2R41P59536 307 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 IL1RL1Q01638 556 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 ADIPOQQ15848 244 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 CLEC12BQ2HXU8 276 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 ABHD12BQ7Z5M8 362 aaPredicted RBP9.23□□□□□ -0.93
CD44-227ENST00000528086 SKA3Q8IX90 412 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 OFCC1Q8IZS5 231 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 RNF148Q8N7C7 305 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 CLDN22Q8N7P3 220 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 OR10H5Q8NGA6 315 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 ASB10Q8WXI3 467 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 HDAC2Q92769 488 aaKnown RBP9.23□□□□□ -0.93
CD44-227ENST00000528086 HSH2DQ96JZ2 352 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 PRRC1Q96M27 445 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 ZNF347Q96SE7 839 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 FUZQ9BT04 418 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 KATNB1Q9BVA0 655 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 ALG2Q9H553 416 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 GLTPQ9NZD2 209 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 CD300AQ9UGN4 299 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 UGT2A1Q9Y4X1 527 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 ATP23Q9Y6H3 246 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 SVEP1Q4LDE5 3571 aa9.23□□□□□ -0.93
CD44-227ENST00000528086 HIVEP2P31629 2446 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 JMJD1CQ15652 2540 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 IGHV4-30-2A0A087WSY4 118 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 RNF223E7ERA6 249 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 BLOC1S5-TXNDC5H3BN57 136 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 H7C417 338 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 RNF13O43567 381 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 TRMUO75648 421 aaKnown RBP9.22□□□□□ -0.93
CD44-227ENST00000528086 SERPINA1P01009 418 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 SEMG1P04279 462 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 HEXAP06865 529 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 THRBP10828 461 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 ZNF35P13682 527 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 PRDX6P30041 224 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 APOBEC3AP31941 199 aaPredicted RBP9.22□□□□□ -0.93
CD44-227ENST00000528086 THBS4P35443 961 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 CSNK1A1P48729 337 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 FXYD6P3P58550 94 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 GNGT1P63211 74 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 VLDLRP98155 873 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 PIGFQ07326 219 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 AGAP6Q5VW22 663 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 ZNF544Q6NX49 715 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 CLEC9AQ6UXN8 241 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 ZNF813Q6ZN06 617 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 ARPINQ7Z6K5 226 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 NRMQ8IXM6 262 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 PAQR4Q8N4S7 273 aaPredicted RBP9.22□□□□□ -0.93
CD44-227ENST00000528086 SGTBQ96EQ0 304 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 SLC25A44Q96H78 314 aaPredicted RBP9.22□□□□□ -0.93
CD44-227ENST00000528086 GPA33Q99795 319 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 FOXB1Q99853 325 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 BDH2Q9BUT1 245 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 ULBP2Q9BZM5 246 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 POLR2J2Q9GZM3 115 aaKnown RBP9.22□□□□□ -0.93
CD44-227ENST00000528086 POLR2J3Q9H1A7 115 aaKnown RBP9.22□□□□□ -0.93
CD44-227ENST00000528086 CA10Q9NS85 328 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 TMEM38BQ9NVV0 291 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 FAM53CQ9NYF3 392 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 NDUFAF4Q9P032 175 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 EGFL7Q9UHF1 273 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 HIF3AQ9Y2N7 669 aa9.22□□□□□ -0.93
CD44-227ENST00000528086 ZNF726A6NNF4 738 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 IMPA2O14732 288 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 GPRIN2O60269 458 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 SCG5P05408 212 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 UBE2NP61088 152 aaKnown RBP9.21□□□□□ -0.94
CD44-227ENST00000528086 MYBPC1Q00872 1141 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 PRKCDQ05655 676 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 FMODQ06828 376 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 SEC23BQ15437 767 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 NANOGNBQ7Z5D8 188 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 IGFN1Q86VF2 1251 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 ZCCHC24Q8N2G6 241 aaKnown RBP9.21□□□□□ -0.94
CD44-227ENST00000528086 SYT14Q8NB59 555 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 OR6N1Q8NGY5 312 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 SLC7A13Q8TCU3 470 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 MCHR2Q969V1 340 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 NABP1Q96AH0 204 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 FBXO17Q96EF6 278 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 DHRS1Q96LJ7 313 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 ADAD1Q96M93 576 aaKnown RBP9.21□□□□□ -0.94
CD44-227ENST00000528086 SORCS2Q96PQ0 1159 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 TNFRSF13CQ96RJ3 184 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 KCNK17Q96T54 332 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 DOK1Q99704 481 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 SH3GL3Q99963 347 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 REG4Q9BYZ8 158 aa9.21□□□□□ -0.94
CD44-227ENST00000528086 NMNAT1Q9HAN9 279 aaPredicted RBP9.21□□□□□ -0.94
CD44-227ENST00000528086 DCAF13Q9NV06 445 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms