RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 SMYD1Q8NB12 490 aa9.1□□□□□ -0.95
CPSF1-203ENST00000527916 IL17RDQ8NFM7 739 aa9.1□□□□□ -0.95
CPSF1-203ENST00000527916 OR4F15Q8NGB8 312 aa9.1□□□□□ -0.95
CPSF1-203ENST00000527916 OR8J3Q8NGG0 315 aa9.1□□□□□ -0.95
CPSF1-203ENST00000527916 OR6T1Q8NGN1 323 aa9.1□□□□□ -0.95
CPSF1-203ENST00000527916 OR10A6Q8NH74 314 aa9.1□□□□□ -0.95
CPSF1-203ENST00000527916 NEU4Q8WWR8 484 aaPredicted RBP9.1□□□□□ -0.95
CPSF1-203ENST00000527916 MPP4Q96JB8 637 aa9.1□□□□□ -0.95
CPSF1-203ENST00000527916 SLC19A3Q9BZV2 496 aa9.1□□□□□ -0.95
CPSF1-203ENST00000527916 CRLF2Q9HC73 371 aa9.1□□□□□ -0.95
CPSF1-203ENST00000527916 GRIP1Q9Y3R0 1128 aa9.1□□□□□ -0.95
CPSF1-203ENST00000527916 TRAPPC13A5PLN9 417 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 BBIP1A8MTZ0 92 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 VSTM5A8MXK1 200 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 M0R3H8 397 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 RGS9O75916 674 aaPredicted RBP9.09□□□□□ -0.95
CPSF1-203ENST00000527916 VIMP08670 466 aaKnown RBP9.09□□□□□ -0.95
CPSF1-203ENST00000527916 HLA-DOBP13765 273 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 IFNGR1P15260 489 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 CD247P20963 164 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 CBLP22681 906 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 ARR3P36575 388 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 ZP4Q12836 540 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 NPTX1Q15818 432 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 CEACAM16Q2WEN9 425 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 MIDNQ504T8 468 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 TTC33Q6PID6 262 aaPredicted RBP9.09□□□□□ -0.95
CPSF1-203ENST00000527916 SNX32Q86XE0 403 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 CALHM3Q86XJ0 350 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 ZNF786Q8N393 782 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 NUP37Q8NFH4 326 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 OR5J2Q8NH18 312 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 RNF217Q8TC41 542 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 SLC26A7Q8TE54 656 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 ADAMTS16Q8TE57 1224 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 LRRC58Q96CX6 371 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 MOGAT1Q96PD6 335 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 ZNF426Q9BUY5 554 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 ZNF747Q9BV97 191 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 TMEM120AQ9BXJ8 343 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 DENND2DQ9H6A0 471 aaPredicted RBP9.09□□□□□ -0.95
CPSF1-203ENST00000527916 CA10Q9NS85 328 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 USP22Q9UPT9 525 aa9.09□□□□□ -0.95
CPSF1-203ENST00000527916 WNK2Q9Y3S1 2297 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 PRKDCP78527 4128 aaKnown RBP9.08□□□□□ -0.96
CPSF1-203ENST00000527916 A0A096LPE4 126 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 A0A1W2PPZ6 126 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 ZNF726A6NNF4 738 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 LYPD3O95274 346 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 HPRP00739 348 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 IGF2P01344 180 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 OPN1SWP03999 348 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 THY1P04216 161 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 OR4A8P0C604 315 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 CECR9P0C854 216 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 ARFIP2P53365 341 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 CRYBA2P53672 197 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 IL1RL1Q01638 556 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 POU3F1Q03052 451 aaPredicted RBP9.08□□□□□ -0.96
CPSF1-203ENST00000527916 KLF10Q13118 480 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 CCNIQ14094 377 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 MAPRE2Q15555 327 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 EFNB3Q15768 340 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 ZNF74Q16587 644 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 PHYHD1Q5SRE7 291 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 ERICH5Q6P6B1 374 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 TREML4Q6UXN2 200 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 SVOPLQ8N434 492 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 C10orf53Q8N6V4 93 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 LRRC17Q8N6Y2 441 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 OR4D11Q8NGI4 311 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 TMEM186Q96B77 213 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 TAMM41Q96BW9 452 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 ZNF837Q96EG3 531 aaPredicted RBP9.08□□□□□ -0.96
CPSF1-203ENST00000527916 TXNDC15Q96J42 360 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 ECSITQ9BQ95 431 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 POLR2J2Q9GZM3 115 aaKnown RBP9.08□□□□□ -0.96
CPSF1-203ENST00000527916 POLR2J3Q9H1A7 115 aaKnown RBP9.08□□□□□ -0.96
CPSF1-203ENST00000527916 PLK3Q9H4B4 646 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 CCDC134Q9H6E4 229 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 ZNF442Q9H7R0 627 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 B3GAT2Q9NPZ5 323 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 SAR1AQ9NR31 198 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 HIF1ANQ9NWT6 349 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 B3GNT2Q9NY97 397 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 PCDHGB1Q9Y5G3 927 aa9.08□□□□□ -0.96
CPSF1-203ENST00000527916 CPSF4LA6NMK7 179 aaKnown RBP9.07□□□□□ -0.96
CPSF1-203ENST00000527916 LRRN3E7EW58 273 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 M0R3G1 203 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 FXYD1O00168 92 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 SLC22A2O15244 555 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 OR6A2O95222 327 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 IFNA14P01570 189 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 ADORA3P0DMS8 318 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 EPHA1P21709 976 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 AHCYP23526 432 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 FOXL1Q12952 345 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 ADIPOQQ15848 244 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 MMEL1Q495T6 779 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 RABL3Q5HYI8 236 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms