RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 RAB39AQ14964 217 aa19.28■□□□□ 0.68
TRAPPC4-208ENST00000527680 TRIP10Q15642 601 aa19.28■□□□□ 0.68
TRAPPC4-208ENST00000527680 ENTPD8Q5MY95 495 aa19.28■□□□□ 0.68
TRAPPC4-208ENST00000527680 UGT2A3Q6UWM9 527 aa19.28■□□□□ 0.68
TRAPPC4-208ENST00000527680 SLC35D2Q76EJ3 337 aa19.28■□□□□ 0.68
TRAPPC4-208ENST00000527680 ZNF627Q7L945 461 aa19.28■□□□□ 0.68
TRAPPC4-208ENST00000527680 PIWIL3Q7Z3Z3 882 aaKnown RBP19.28■□□□□ 0.68
TRAPPC4-208ENST00000527680 WDFY1Q8IWB7 410 aa19.28■□□□□ 0.68
TRAPPC4-208ENST00000527680 VANGL1Q8TAA9 524 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC4-208ENST00000527680 SLC26A7Q8TE54 656 aa19.28■□□□□ 0.68
TRAPPC4-208ENST00000527680 THOC1Q96FV9 657 aaKnown RBP19.28■□□□□ 0.68
TRAPPC4-208ENST00000527680 GLTPQ9NZD2 209 aa19.28■□□□□ 0.68
TRAPPC4-208ENST00000527680 FZR1Q9UM11 496 aa19.28■□□□□ 0.68
TRAPPC4-208ENST00000527680 ANGPT2O15123 496 aa19.27■□□□□ 0.68
TRAPPC4-208ENST00000527680 RNF13O43567 381 aa19.27■□□□□ 0.68
TRAPPC4-208ENST00000527680 CHP2O43745 196 aa19.27■□□□□ 0.68
TRAPPC4-208ENST00000527680 FMO6PO60774 539 aa19.27■□□□□ 0.68
TRAPPC4-208ENST00000527680 C8BP07358 591 aa19.27■□□□□ 0.68
TRAPPC4-208ENST00000527680 IGFBP1P08833 259 aaPredicted RBP19.27■□□□□ 0.68
TRAPPC4-208ENST00000527680 PATE4P0C8F1 98 aa19.27■□□□□ 0.68
TRAPPC4-208ENST00000527680 ALDH3B1P43353 468 aa19.27■□□□□ 0.68
TRAPPC4-208ENST00000527680 MTPNP58546 118 aa19.27■□□□□ 0.68
TRAPPC4-208ENST00000527680 RPS23P62266 143 aaKnown RBP19.27■□□□□ 0.68
TRAPPC4-208ENST00000527680 RBBP4Q09028 425 aa19.27■□□□□ 0.68
TRAPPC4-208ENST00000527680 RIN1Q13671 783 aa19.27■□□□□ 0.68
TRAPPC4-208ENST00000527680 CCNIQ14094 377 aa19.27■□□□□ 0.68
TRAPPC4-208ENST00000527680 DHDDSQ86SQ9 333 aa19.27■□□□□ 0.68
TRAPPC4-208ENST00000527680 PTOV1Q86YD1 416 aa19.27■□□□□ 0.68
TRAPPC4-208ENST00000527680 SKA3Q8IX90 412 aa19.27■□□□□ 0.68
TRAPPC4-208ENST00000527680 OR6T1Q8NGN1 323 aa19.27■□□□□ 0.68
TRAPPC4-208ENST00000527680 ZNF75AQ96N20 296 aa19.27■□□□□ 0.68
TRAPPC4-208ENST00000527680 ARHGDIGQ99819 225 aa19.27■□□□□ 0.68
TRAPPC4-208ENST00000527680 NANSQ9NR45 359 aa19.27■□□□□ 0.68
TRAPPC4-208ENST00000527680 FBXL3Q9UKT7 428 aa19.27■□□□□ 0.68
TRAPPC4-208ENST00000527680 KPNA4O00629 521 aaPredicted RBP19.26■□□□□ 0.67
TRAPPC4-208ENST00000527680 ENTPD5O75356 428 aa19.26■□□□□ 0.67
TRAPPC4-208ENST00000527680 UMPSP11172 480 aa19.26■□□□□ 0.67
TRAPPC4-208ENST00000527680 SEC24CP53992 1094 aa19.26■□□□□ 0.67
TRAPPC4-208ENST00000527680 MSMPQ1L6U9 139 aa19.26■□□□□ 0.67
TRAPPC4-208ENST00000527680 LINC00114Q6XXX2 140 aa19.26■□□□□ 0.67
TRAPPC4-208ENST00000527680 LRP11Q86VZ4 500 aa19.26■□□□□ 0.67
TRAPPC4-208ENST00000527680 OR6X1Q8NH79 312 aa19.26■□□□□ 0.67
TRAPPC4-208ENST00000527680 ZNF566Q969W8 418 aa19.26■□□□□ 0.67
TRAPPC4-208ENST00000527680 ATP6V1G3Q96LB4 118 aa19.26■□□□□ 0.67
TRAPPC4-208ENST00000527680 CGREF1Q99674 301 aa19.26■□□□□ 0.67
TRAPPC4-208ENST00000527680 RNF121Q9H920 327 aa19.26■□□□□ 0.67
TRAPPC4-208ENST00000527680 ZNF224Q9NZL3 707 aa19.26■□□□□ 0.67
TRAPPC4-208ENST00000527680 SVEP1Q4LDE5 3571 aa19.25■□□□□ 0.67
TRAPPC4-208ENST00000527680 HAX1O00165 279 aa19.25■□□□□ 0.67
TRAPPC4-208ENST00000527680 FARS2O95363 451 aaKnown RBP19.25■□□□□ 0.67
TRAPPC4-208ENST00000527680 OR8G3PP0DMU2 310 aa19.25■□□□□ 0.67
TRAPPC4-208ENST00000527680 PCBP3P57721 371 aaKnown RBP19.25■□□□□ 0.67
TRAPPC4-208ENST00000527680 MAD2L1BPQ15013 274 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC4-208ENST00000527680 ZNF74Q16587 644 aa19.25■□□□□ 0.67
TRAPPC4-208ENST00000527680 RBM45Q8IUH3 476 aaKnown RBP19.25■□□□□ 0.67
TRAPPC4-208ENST00000527680 SLC22A24Q8N4F4 322 aa19.25■□□□□ 0.67
TRAPPC4-208ENST00000527680 LRRC17Q8N6Y2 441 aa19.25■□□□□ 0.67
TRAPPC4-208ENST00000527680 GPR32P1Q8NGA4 272 aa19.25■□□□□ 0.67
TRAPPC4-208ENST00000527680 ADAMTS16Q8TE57 1224 aa19.25■□□□□ 0.67
TRAPPC4-208ENST00000527680 TMEM54Q969K7 222 aa19.25■□□□□ 0.67
TRAPPC4-208ENST00000527680 TAS2R5Q9NYW4 299 aa19.25■□□□□ 0.67
TRAPPC4-208ENST00000527680 SLC7A7Q9UM01 511 aa19.25■□□□□ 0.67
TRAPPC4-208ENST00000527680 A0A1W2PPW3 197 aa19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 HPXP02790 462 aa19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 SERPINA5P05154 406 aa19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 VIMP08670 466 aaKnown RBP19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 COL8A2P25067 703 aa19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 GPR6P46095 362 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 CDH15P55291 814 aa19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 SELENOVP59797 346 aa19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 ZP4Q12836 540 aa19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 NFYCQ13952 458 aa19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 SELPLGQ14242 412 aa19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 MELKQ14680 651 aa19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 NPTX1Q15818 432 aa19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 REP15Q6BDI9 236 aa19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 WDR88Q6ZMY6 472 aa19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 PATL1Q86TB9 770 aaKnown RBP19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 SLC30A8Q8IWU4 369 aa19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 FGFBP3Q8TAT2 258 aa19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 RDH5Q92781 318 aa19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 SLC25A44Q96H78 314 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 SH3GL3Q99963 347 aa19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 NARFLQ9H6Q4 476 aa19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 INTS9Q9NV88 658 aaKnown RBP19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 SLC7A8Q9UHI5 535 aa19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 TRIM33Q9UPN9 1127 aa19.24■□□□□ 0.67
TRAPPC4-208ENST00000527680 TRAPPC13A5PLN9 417 aa19.23■□□□□ 0.67
TRAPPC4-208ENST00000527680 BLOC1S5-TXNDC5H3BN57 136 aa19.23■□□□□ 0.67
TRAPPC4-208ENST00000527680 BCL10O95999 233 aa19.23■□□□□ 0.67
TRAPPC4-208ENST00000527680 NAT2P11245 290 aa19.23■□□□□ 0.67
TRAPPC4-208ENST00000527680 CD247P20963 164 aa19.23■□□□□ 0.67
TRAPPC4-208ENST00000527680 PCMT1P22061 227 aa19.23■□□□□ 0.67
TRAPPC4-208ENST00000527680 ELFN2Q5R3F8 820 aa19.23■□□□□ 0.67
TRAPPC4-208ENST00000527680 LRFN4Q6PJG9 635 aa19.23■□□□□ 0.67
TRAPPC4-208ENST00000527680 DPP10Q8N608 796 aa19.23■□□□□ 0.67
TRAPPC4-208ENST00000527680 OR10A6Q8NH74 314 aa19.23■□□□□ 0.67
TRAPPC4-208ENST00000527680 MPP4Q96JB8 637 aa19.23■□□□□ 0.67
TRAPPC4-208ENST00000527680 MYEF2Q9P2K5 600 aaKnown RBP19.23■□□□□ 0.67
TRAPPC4-208ENST00000527680 B4DSR2 109 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms