RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 GABRA1P14867 456 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 IL32P24001 234 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 H2BFSP57053 126 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 MELKQ14680 651 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 RBMS2Q15434 407 aaKnown RBP11.39□□□□□ -0.59
CAPN1-208ENST00000527323 NNATQ16517 81 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 PRICKLE4Q2TBC4 344 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 Q499Y3 187 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 ZCCHC12Q6PEW1 402 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 DPY19L2P2Q6ZN68 376 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 ESX1Q8N693 406 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 MAFAQ8NHW3 353 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-208ENST00000527323 FBXW5Q969U6 566 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 PNPLA2Q96AD5 504 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 DNAJB12Q9NXW2 375 aaKnown RBP11.39□□□□□ -0.59
CAPN1-208ENST00000527323 OPN4Q9UHM6 478 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 LAMA5O15230 3695 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 KCNJ13O60928 360 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 SMIM10L1P0DMW3 83 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 SRFP11831 508 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 GTF2F2P13984 249 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 PVRP15151 417 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 DRD1P21728 446 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 PLA2G7Q13093 441 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 LPAL2Q16609 132 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 LIPNQ5VXI9 398 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 ZNF676Q8N7Q3 588 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 OR2AK2Q8NG84 335 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 OR4C16Q8NGL9 310 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 SMIM10Q96HG1 83 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 OR2M4Q96R27 311 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 MRI1Q9BV20 369 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 MFFQ9GZY8 342 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-208ENST00000527323 RP1P56715 2156 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 C4orf47A7E2U8 309 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 PRR32B1ATL7 298 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 H0YGG7 62 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 ADRA2CP18825 462 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 ACTR1BP42025 376 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 ACTR1AP61163 376 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 ARF3P61204 181 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-208ENST00000527323 SORDQ00796 357 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 ZNF273Q14593 569 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 TMEM164Q5U3C3 297 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 ZNF550Q7Z398 422 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 OR13H1Q8NG92 308 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 B3GNT4Q9C0J1 378 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 EXO5Q9H790 373 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 STARD5Q9NSY2 213 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 GLS2Q9UI32 602 aa11.39□□□□□ -0.59
CAPN1-208ENST00000527323 CNTRLQ7Z7A1 2325 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 ZFHX2Q9C0A1 2572 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-208ENST00000527323 OR6C74A6NCV1 312 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 TVP23AA6NH52 213 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 GLCEO94923 617 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 GLSO94925 669 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-208ENST00000527323 ADH1BP00325 375 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 FBXO45P0C2W1 286 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 MAPK3P27361 379 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-208ENST00000527323 FNTBP49356 437 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 GPR143P51810 404 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 ALKBH1Q13686 389 aaKnown RBP11.38□□□□□ -0.59
CAPN1-208ENST00000527323 SLC35D3Q5M8T2 416 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 DCAF12L2Q5VW00 463 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 B3GNTL1Q67FW5 361 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-208ENST00000527323 OR7E24Q6IFN5 339 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 MUC20Q8N307 709 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-208ENST00000527323 SLC43A2Q8N370 569 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 RELL2Q8NC24 303 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-208ENST00000527323 BVESQ8NE79 360 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 TSTD1Q8NFU3 115 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 OR4D10Q8NGI6 311 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 OR51S1Q8NGJ8 323 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 OR1E3Q8WZA6 343 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 DVL3Q92997 716 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-208ENST00000527323 TM4SF19Q96DZ7 209 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 BMFQ96LC9 184 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 LRFN5Q96NI6 719 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 GABRG3Q99928 467 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 GAL3ST1Q99999 423 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 ZNF426Q9BUY5 554 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 KNTC1P50748 2209 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 TRAV18A0A075B6X5 111 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 OR6C65A6NJZ3 312 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 PCP4L1A6NKN8 68 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 HMSDA8MTL9 139 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 A8MXK9 166 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 CTNSO60931 367 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 PLATP00750 562 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 PGDP52209 483 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 GUCA2AQ02747 115 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 DGAT2L6Q6ZPD8 337 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 OVCH2Q7RTZ1 564 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 ZNF227Q86WZ6 799 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 NSMAFQ92636 917 aa11.38□□□□□ -0.59
CAPN1-208ENST00000527323 PRSS38A1L453 326 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 LDOC1O95751 146 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-208ENST00000527323 SEMA4FO95754 770 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 CSTAP01040 98 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms