RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 K7N7A8 449 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 L7N2F9 121 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 IGHV3-48P01763 117 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 ABOP16442 354 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 ZNF43P17038 809 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 AQP1P29972 269 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 RRM2P31350 389 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 GLP1RP43220 463 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 RAB9AP51151 201 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 FBXW4P57775 412 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 MRPS22P82650 360 aaKnown RBP3.04□□□□□ -1.92
CD44-223ENST00000526553 ZNF45Q02386 682 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 MERTKQ12866 999 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 C1orf146Q5VVC0 180 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 KHDRBS2Q5VWX1 349 aaKnown RBP3.04□□□□□ -1.92
CD44-223ENST00000526553 TIGD3Q6B0B8 471 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 SLC8B1Q6J4K2 584 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 CCDC73Q6ZRK6 1079 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 OTUD6AQ7L8S5 288 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 HSD17B13Q7Z5P4 300 aaPredicted RBP3.04□□□□□ -1.92
CD44-223ENST00000526553 SCD5Q86SK9 330 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 ZNF589Q86UQ0 364 aaPredicted RBP3.04□□□□□ -1.92
CD44-223ENST00000526553 RDH10Q8IZV5 341 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 COMMD1Q8N668 190 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 B3GNT7Q8NFL0 401 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 OR10G3Q8NGC4 313 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 OR2AP1Q8NGE2 309 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 OR51S1Q8NGJ8 323 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 FAM110BQ8TC76 370 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 AGR3Q8TD06 166 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 CHCHD10Q8WYQ3 142 aaPredicted RBP3.04□□□□□ -1.92
CD44-223ENST00000526553 PLEKHF1Q96S99 279 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 KCTD14Q9BQ13 255 aaPredicted RBP3.04□□□□□ -1.92
CD44-223ENST00000526553 C20orf24Q9BUV8 137 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 FAIM2Q9BWQ8 316 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 KRTAP4-3Q9BYR4 195 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 AUNIPQ9H7T9 357 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 MRPL47Q9HD33 250 aaKnown RBP3.04□□□□□ -1.92
CD44-223ENST00000526553 SH2D2AQ9NP31 389 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 IL26Q9NPH9 171 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 TREM2Q9NZC2 230 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 KCNIP1Q9NZI2 227 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 KIAA1257Q9ULG3 409 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 PHLPP1O60346 1717 aa3.04□□□□□ -1.92
CD44-223ENST00000526553 ATP7AQ04656 1500 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 SYCP2Q9BX26 1530 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 FAM135AQ9P2D6 1515 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 FMN1Q68DA7 1419 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 FRMPD3Q5JV73 1810 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 SYNRGQ9UMZ2 1314 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 A0A0G2JRQ6 117 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 H0YC42 278 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 DLGAP1O14490 977 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 DFNA5O60443 496 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 H6PDO95479 791 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 RBMY1CP0DJD4 496 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 FUT3P21217 361 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 HNRNPH3P31942 346 aaKnown RBP3.03□□□□□ -1.92
CD44-223ENST00000526553 FOXN2P32314 431 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 TFPI2P48307 235 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 ARRB1P49407 418 aaPredicted RBP3.03□□□□□ -1.92
CD44-223ENST00000526553 EGFEM1PQ0D2K5 195 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 CHRNA6Q15825 494 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 ZNF658BQ4V348 819 aaPredicted RBP3.03□□□□□ -1.92
CD44-223ENST00000526553 C1orf185Q5T7R7 199 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 EIF3MQ7L2H7 374 aaKnown RBP3.03□□□□□ -1.92
CD44-223ENST00000526553 SSX9Q7RTT3 188 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 ZNF571Q7Z3V5 609 aaPredicted RBP3.03□□□□□ -1.92
CD44-223ENST00000526553 SLC26A11Q86WA9 606 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 ZNF100Q8IYN0 542 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 TMEM252Q8N6L7 170 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 ACOT4Q8N9L9 421 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 PLPPR1Q8TBJ4 325 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 ACMSDQ8TDX5 336 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 STARD8Q92502 1023 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 FGF11Q92914 225 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 HSFY1Q96LI6 401 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 SORT1Q99523 831 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 P2RY13Q9BPV8 354 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 EBF4Q9BQW3 602 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 NICN1Q9BSH3 213 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 ACTR6Q9GZN1 396 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 IQCGQ9H095 443 aaKnown RBP3.03□□□□□ -1.92
CD44-223ENST00000526553 PTGES2Q9H7Z7 377 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 GEMIN7Q9H840 131 aaKnown RBP3.03□□□□□ -1.92
CD44-223ENST00000526553 MYOZ2Q9NPC6 264 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 EXD2Q9NVH0 621 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 CD274Q9NZQ7 290 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 KIF25Q9UIL4 384 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 PITPNC1Q9UKF7 332 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 UGT2A1Q9Y4X1 527 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 ROBO1Q9Y6N7 1651 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 ALKQ9UM73 1620 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 SYNMO15061 1565 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 UGGT1Q9NYU2 1555 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 LRRC7Q96NW7 1537 aa3.03□□□□□ -1.92
CD44-223ENST00000526553 GTF3C1Q12789 2109 aa3.02□□□□□ -1.93
CD44-223ENST00000526553 PLEKHG2Q9H7P9 1386 aa3.02□□□□□ -1.93
CD44-223ENST00000526553 TTC41PQ6P2S7 1318 aa3.02□□□□□ -1.93
CD44-223ENST00000526553 CDHR2Q9BYE9 1310 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms