RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 BBS1Q8NFJ9 593 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 OR9A1PQ8NGU1 263 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 OR2G2Q8NGZ5 317 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 FRAT1Q92837 279 aaPredicted RBP3.33□□□□□ -1.88
CSDE1-211ENST00000525970 NEIL2Q969S2 332 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 ARHGDIGQ99819 225 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 PELOQ9BRX2 385 aaKnown RBP3.33□□□□□ -1.88
CSDE1-211ENST00000525970 MRPL37Q9BZE1 423 aaKnown RBP3.33□□□□□ -1.88
CSDE1-211ENST00000525970 RANBP3Q9H6Z4 567 aaPredicted RBP3.33□□□□□ -1.88
CSDE1-211ENST00000525970 IL26Q9NPH9 171 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 QPCTLQ9NXS2 382 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 CALYQ9NYX4 217 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 MOKQ9UQ07 419 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 CDH10Q9Y6N8 788 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 TP53BP1Q12888 1972 aaPredicted RBP3.32□□□□□ -1.88
CSDE1-211ENST00000525970 A0A0G2JLM5 398 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 FAM231BA6NCW3 169 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 RBMY1BA6NDE4 496 aaKnown RBP3.32□□□□□ -1.88
CSDE1-211ENST00000525970 RBMY1EA6NEQ0 496 aaKnown RBP3.32□□□□□ -1.88
CSDE1-211ENST00000525970 C12orf77C9JDV5 145 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 NEMFO60524 1076 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 EEDO75530 441 aaKnown RBP3.32□□□□□ -1.88
CSDE1-211ENST00000525970 SNAPINO95295 136 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 TIMP1P01033 207 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 CSTAP01040 98 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 IVLP07476 585 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 RBMY1DP0C7P1 496 aaKnown RBP3.32□□□□□ -1.88
CSDE1-211ENST00000525970 P0C879 139 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 UBCP0CG48 685 aaKnown RBP3.32□□□□□ -1.88
CSDE1-211ENST00000525970 CCDC166P0CW27 439 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 RBMY1A1P0DJD3 496 aaKnown RBP3.32□□□□□ -1.88
CSDE1-211ENST00000525970 CTRB1P17538 263 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 TCN1P20061 433 aaPredicted RBP3.32□□□□□ -1.88
CSDE1-211ENST00000525970 GPR6P46095 362 aaPredicted RBP3.32□□□□□ -1.88
CSDE1-211ENST00000525970 TGFBR3Q03167 851 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 ACVR1Q04771 509 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 PDIA2Q13087 525 aaKnown RBP3.32□□□□□ -1.88
CSDE1-211ENST00000525970 ATP6AP1Q15904 470 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 PPM1LQ5SGD2 360 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 CTRB2Q6GPI1 263 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 H3F3CQ6NXT2 135 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 TMIGD1Q6UXZ0 262 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 TFAP2EQ6VUC0 442 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 RFLNAQ6ZTI6 216 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 ZNF571Q7Z3V5 609 aaPredicted RBP3.32□□□□□ -1.88
CSDE1-211ENST00000525970 VTCN1Q7Z7D3 282 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 TMEM135Q86UB9 458 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 CMTM1Q8IZ96 169 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 TMEM252Q8N6L7 170 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 ZNF525Q8N782 197 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 HSD17B11Q8NBQ5 300 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 VN1R2Q8NFZ6 395 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 OR56A4Q8NGH8 313 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 OR2L2Q8NH16 312 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 C7orf33Q8WU49 177 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 CAPSLQ8WWF8 208 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 MYDGFQ969H8 173 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 ASB9Q96DX5 294 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 RARRES2Q99969 163 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 DEFB126Q9BYW3 111 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 OR2AG1Q9H205 316 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 XKR8Q9H6D3 395 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 ISG20L2Q9H9L3 353 aaKnown RBP3.32□□□□□ -1.88
CSDE1-211ENST00000525970 PXMP2Q9NR77 195 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 EXD2Q9NVH0 621 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 KCNIP1Q9NZI2 227 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 XCL2Q9UBD3 114 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 CLCF1Q9UBD9 225 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 UXTQ9UBK9 157 aaPredicted RBP3.32□□□□□ -1.88
CSDE1-211ENST00000525970 CHD4Q14839 1912 aa3.32□□□□□ -1.88
CSDE1-211ENST00000525970 COL5A2P05997 1499 aaPredicted RBP3.31□□□□□ -1.88
CSDE1-211ENST00000525970 A0A1B0GUH1 482 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 A0A1W2PPV4 95 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 ERICH4A6NGS2 130 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 ZNF726A6NNF4 738 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 USP27XA6NNY8 438 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 KRTAP4-16G5E9R7 235 aaPredicted RBP3.31□□□□□ -1.88
CSDE1-211ENST00000525970 CDC7O00311 574 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 DYNC1I1O14576 645 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 PPP1R2P9O14990 202 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 RNF113AO15541 343 aaKnown RBP3.31□□□□□ -1.88
CSDE1-211ENST00000525970 BCL2L11O43521 198 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 FCN3O75636 299 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 EIF3GO75821 320 aaKnown RBP eCLIP3.31□□□□□ -1.88
CSDE1-211ENST00000525970 CD160O95971 181 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 FOLR1P15328 257 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 GATA2P23769 480 aaPredicted RBP3.31□□□□□ -1.88
CSDE1-211ENST00000525970 YWHAGP61981 247 aaKnown RBP eCLIP3.31□□□□□ -1.88
CSDE1-211ENST00000525970 C15orf32Q32M92 178 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 TCTEX1D4Q5JR98 221 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 CASC10Q5T4H9 136 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 ZNF658Q5TYW1 1059 aaPredicted RBP3.31□□□□□ -1.88
CSDE1-211ENST00000525970 ANKRD26P1Q6NSI1 321 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 FAM122BQ7Z309 247 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 SH2D6Q7Z4S9 175 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 HSD17B13Q7Z5P4 300 aaPredicted RBP3.31□□□□□ -1.88
CSDE1-211ENST00000525970 ZNF100Q8IYN0 542 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 SLC39A11Q8N1S5 342 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 EID2Q8N6I1 236 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 TTC29Q8NA56 475 aaPredicted RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms