RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 OR51I1Q9H343 314 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 PPP1R3EQ9H7J1 279 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 NANOGQ9H9S0 305 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 TPT1P8Q9HAU6 139 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 IL1RL2Q9HB29 575 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 SH2D2AQ9NP31 389 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 EQTNQ9NQ60 294 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 DEPPQ9NTK1 212 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 ZCCHC3Q9NUD5 404 aaKnown RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 ATAD3AQ9NVI7 634 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 DDX18Q9NVP1 670 aaKnown RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 FAM120CQ9NX05 1096 aaKnown RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 CMTM6Q9NX76 183 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 GPR83Q9NYM4 423 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 C19orf25Q9UFG5 118 aaPredicted RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 BCAP29Q9UHQ4 241 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 PSME2Q9UL46 239 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 TP53TG5Q9Y2B4 290 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 WBP11Q9Y2W2 641 aaKnown RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 ARL2BPQ9Y2Y0 163 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 NDUFAF1Q9Y375 327 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 FAM96BQ9Y3D0 163 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 OR2W1Q9Y3N9 320 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 SNX8Q9Y5X2 465 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 GMEB1Q9Y692 573 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 CLCA3PQ9Y6N3 262 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 CAPN7Q9Y6W3 813 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 TACC2O95359 2948 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 HCFC1P51610 2035 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 ZNF469Q96JG9 3925 aaPredicted RBP2.62□□□□□ -1.99
CSDE1-208ENST00000524652 CACNA1CQ13936 2221 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 RYR1P21817 5038 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 A0A096LPI6 279 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 GAGE10A6NGK3 116 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 FRG2CA6NGY1 282 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 CCT8L1PA6NM43 557 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 CLDN24A6NM45 220 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 OR6C76A6NM76 312 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 A8MUI8 341 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 NPIPB9F8W1W9 429 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 G3V3Y1 287 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 NDUFAB1O14561 156 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 MRASO14807 208 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 AIM2O14862 343 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 ANGPT2O15123 496 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 TO15178 435 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 SLC22A2O15244 555 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 ZNHIT1O43257 154 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 FADS1O60427 444 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 FCMRO60667 390 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 CCDC22O60826 627 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 ICOSLGO75144 302 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 ZFAND5O76080 213 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 KCNK2O95069 426 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 OXSR1O95747 527 aaPredicted RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 TFP02787 698 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 PRB1P04280 392 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 TFPTP0C1Z6 253 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 PATE4P0C8F1 98 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 GPX2P18283 190 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 UQCRC2P22695 453 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 GABRA3P34903 492 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 RFC3P40938 356 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 PPICP45877 212 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 TRPC1P48995 793 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 DNASE1L1P49184 302 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 NUDT2P50583 147 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 UCNP55089 124 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 IRX1P78414 480 aaPredicted RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 MRPS22P82650 360 aaKnown RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 FOXD4Q12950 439 aaPredicted RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 BIKQ13323 160 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 MFAP5Q13361 173 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 CEACAM7Q14002 265 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 CYLC2Q14093 348 aaPredicted RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 ESPL1Q14674 2120 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 RGNQ15493 299 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 EXT1Q16394 746 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 MAPK14Q16539 360 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 NTRK2Q16620 822 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 MEP1AQ16819 746 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 TRMT5Q32P41 509 aaKnown RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 NDUFAF6Q330K2 333 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 ZNF791Q3KP31 576 aaPredicted RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 GRAMD1BQ3KR37 738 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 GLIPR1L2Q4G1C9 344 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 PRR30Q53SZ7 412 aaPredicted RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 COQ5Q5HYK3 327 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 DCST2Q5T1A1 773 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 ZC2HC1BQ5TFG8 222 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 GKAP1Q5VSY0 366 aaPredicted RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 ANXA8L1Q5VT79 327 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 PRAMEF20Q5VT98 475 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 AP1ARQ63HQ0 302 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 SPINK14Q6IE38 97 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 TNFAIP8L2Q6P589 184 aaPredicted RBP2.61□□□□□ -1.99
CSDE1-208ENST00000524652 TMEM81Q6P7N7 255 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 HSDL2Q6YN16 418 aa2.61□□□□□ -1.99
CSDE1-208ENST00000524652 FRRS1Q6ZNA5 592 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms