RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	PMM1	Q92871	262 aa		7.12	□□□□□ -1.27
SPIDR-223	ENST00000524033	PELI1	Q96FA3	418 aa		7.12	□□□□□ -1.27
SPIDR-223	ENST00000524033	DDO	Q99489	341 aa		7.12	□□□□□ -1.27
SPIDR-223	ENST00000524033	MACROD1	Q9BQ69	325 aa		7.12	□□□□□ -1.27
SPIDR-223	ENST00000524033	DPCD	Q9BVM2	203 aa	Predicted RBP	7.12	□□□□□ -1.27
SPIDR-223	ENST00000524033	SEMA6C	Q9H3T2	930 aa		7.12	□□□□□ -1.27
SPIDR-223	ENST00000524033	KIR3DX1	Q9H7L2	352 aa		7.12	□□□□□ -1.27
SPIDR-223	ENST00000524033	MCCC2	Q9HCC0	563 aa		7.12	□□□□□ -1.27
SPIDR-223	ENST00000524033	HRASLS	Q9HDD0	168 aa		7.12	□□□□□ -1.27
SPIDR-223	ENST00000524033	MEPE	Q9NQ76	525 aa	Predicted RBP	7.12	□□□□□ -1.27
SPIDR-223	ENST00000524033	POLE3	Q9NRF9	147 aa		7.12	□□□□□ -1.27
SPIDR-223	ENST00000524033	C14orf105	Q9NVL8	296 aa		7.12	□□□□□ -1.27
SPIDR-223	ENST00000524033	AKAP7	Q9P0M2	348 aa	Predicted RBP	7.12	□□□□□ -1.27
SPIDR-223	ENST00000524033	KCNE5	Q9UJ90	142 aa		7.12	□□□□□ -1.27
SPIDR-223	ENST00000524033	C19orf53	Q9UNZ5	99 aa	Predicted RBP	7.12	□□□□□ -1.27
SPIDR-223	ENST00000524033	SLC17A4	Q9Y2C5	497 aa		7.12	□□□□□ -1.27
SPIDR-223	ENST00000524033	SPEF1	Q9Y4P9	236 aa		7.12	□□□□□ -1.27
SPIDR-223	ENST00000524033	TMEM131	Q92545	1883 aa		7.12	□□□□□ -1.27
SPIDR-223	ENST00000524033	PIEZO2	Q9H5I5	2752 aa		7.12	□□□□□ -1.27
SPIDR-223	ENST00000524033	SCN3A	Q9NY46	2000 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	TRBV23OR9-2	A0A075B6M9	112 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033		A0A087WV62	115 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033		A0A0B4J2E0	115 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033		A0A1B0GX12	115 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	hCG_1807616	A0A1W2PRN6	198 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	PLSCR5	A0PG75	271 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	CIB4	A0PJX0	185 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	RIIAD1	A6NNX1	92 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	GABARAP	H6UMI1	98 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033		I3L521	148 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033		J3QLW9	94 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	PIN1P1	O15428	100 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	SULT1B1	O43704	296 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	GPRIN2	O60269	458 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	KCNJ13	O60928	360 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	LDB3	O75112	727 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	TSC22D2	O75157	780 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	B3GALNT1	O75752	331 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	SCO1	O75880	301 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	ARL6IP5	O75915	188 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	OR2A4	O95047	310 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	PPP1R3D	O95685	299 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	AK1	P00568	194 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	MT-ND4	P03905	459 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	ATP1B1	P05026	303 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	HOXD4	P09016	255 aa	Predicted RBP	7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	CLU	P10909	449 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	CPN1	P15169	458 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	ZNF19	P17023	458 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	LOR	P23490	312 aa	Predicted RBP	7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	AK4	P27144	223 aa	Predicted RBP	7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	CD1C	P29017	333 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	CMPK1	P30085	196 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	CALCR	P30988	508 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	ATP6V1E1	P36543	226 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	GPR3	P46089	330 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	GDI2	P50395	445 aa	Known RBP	7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	ZNF81	P51508	661 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	BLVRA	P53004	296 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	MAZ	P56270	477 aa	Known RBP	7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	VSX2	P58304	361 aa	Predicted RBP	7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	IL10RA	Q13651	578 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	LY6D	Q14210	128 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	OPCML	Q14982	345 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	TGIF1	Q15583	401 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	RPE65	Q16518	533 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	NHLRC3	Q5JS37	347 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	DCST2	Q5T1A1	773 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	METTL11B	Q5VVY1	283 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	ARHGAP11A	Q6P4F7	1023 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	RPTN	Q6XPR3	784 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	ZNF574	Q6ZN55	896 aa	Predicted RBP	7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033		Q6ZTK2	550 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	KRT74	Q7RTS7	529 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	OVCH2	Q7RTZ1	564 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	TMPRSS9	Q7Z410	1059 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	LSR	Q86X29	649 aa	Predicted RBP	7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	C17orf82	Q86X59	251 aa	Predicted RBP	7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	GRAMD2A	Q8IUY3	354 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	FAM20C	Q8IXL6	584 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	CMTM4	Q8IZR5	234 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	OR8H3	Q8N146	312 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	POMGNT2	Q8NAT1	580 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	FLVCR1-AS1	Q8TAF5	88 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	GHSR	Q92847	366 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	TM4SF19	Q96DZ7	209 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	EAF1	Q96JC9	268 aa	Predicted RBP	7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	ART5	Q96L15	291 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	OR2A7	Q96R45	310 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	STAC	Q99469	402 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	NRIP3	Q9NQ35	241 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	DUSP22	Q9NRW4	184 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	SPHK1	Q9NYA1	384 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	CHRNA9	Q9UGM1	479 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	PLEKHM1	Q9Y4G2	1056 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	ZNF780B	Q9Y6R6	833 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	ZNF462	Q96JM2	2506 aa		7.11	□□□□□ -1.27
SPIDR-223	ENST00000524033	IGHV5-10-1	A0A0J9YXX1	117 aa		7.1	□□□□□ -1.27
SPIDR-223	ENST00000524033		A0A1W2PRG6	482 aa		7.1	□□□□□ -1.27
SPIDR-223	ENST00000524033	ANKRD20A5P	A0PJZ0	165 aa		7.1	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms