RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 NMNAT2Q9BZQ4 307 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 GP6Q9HCN6 339 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 SCN3BQ9NY72 215 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 EMC3Q9P0I2 261 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 KLHL13Q9P2N7 655 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 CLCF1Q9UBD9 225 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.63□□□□□ -0.55
CPNE3-205ENST00000522240 DNAJC13O75165 2243 aa11.63□□□□□ -0.55
CPNE3-205ENST00000522240 PRSS37A4D1T9 235 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 TRIM64A6NGJ6 449 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 SLC22A31A6NKX4 558 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 CLCA1A8K7I4 914 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 AHRRA9YTQ3 701 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 J3QKU1 62 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 ENTPD6O75354 484 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 IGHG1P01857 330 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 PIPP12273 146 aaPredicted RBP11.62□□□□□ -0.55
CPNE3-205ENST00000522240 CRHBPP24387 322 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 PTGS2P35354 604 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 PTGER4P35408 488 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 CDKN2AP42771 156 aaKnown RBP11.62□□□□□ -0.55
CPNE3-205ENST00000522240 CDH11P55287 796 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 BIDP55957 195 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 ZNF91Q05481 1191 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 LGALS3BPQ08380 585 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 RASGEF1BQ0VAM2 473 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 SLC35D3Q5M8T2 416 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 EEF1A1P5Q5VTE0 462 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 PLBD1Q6P4A8 553 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 PCSK4Q6UW60 755 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 FGD2Q7Z6J4 655 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 CPOQ8IVL8 374 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 CISD2Q8N5K1 135 aaKnown RBP11.62□□□□□ -0.55
CPNE3-205ENST00000522240 CYB561A3Q8NBI2 242 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 NOXO1Q8NFA2 376 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 FNDC9Q8TBE3 224 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 FNDC8Q8TC99 324 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 ROBO4Q8WZ75 1007 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 TMEM45BQ96B21 275 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 SNRNP40Q96DI7 357 aaKnown RBP11.62□□□□□ -0.55
CPNE3-205ENST00000522240 NMNAT3Q96T66 252 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 BCO1Q9HAY6 547 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 CCNB1IP1Q9NPC3 277 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 MED29Q9NX70 200 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 CNOT2Q9NZN8 540 aaKnown RBP11.62□□□□□ -0.55
CPNE3-205ENST00000522240 TNFRSF10DQ9UBN6 386 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 AASSQ9UDR5 926 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 TPRKBQ9Y3C4 175 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 RPL36Q9Y3U8 105 aaKnown RBP11.62□□□□□ -0.55
CPNE3-205ENST00000522240 FLVCR1Q9Y5Y0 555 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 FKBP7Q9Y680 259 aa11.62□□□□□ -0.55
CPNE3-205ENST00000522240 TLN1Q9Y490 2541 aaKnown RBP11.62□□□□□ -0.55
CPNE3-205ENST00000522240 IRGMA1A4Y4 181 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 MAGEA13PA6NCF6 341 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 OR6C68A6NDL8 312 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 EFCAB10A6NFE3 127 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 SLC22A20A6NK97 555 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 FAM183AA6NL82 134 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 ZNF724A8MTY0 619 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 ARHGEF9O43307 516 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 MRPS14O60783 128 aaKnown RBP11.61□□□□□ -0.55
CPNE3-205ENST00000522240 FAM20BO75063 409 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 TRMUO75648 421 aaKnown RBP11.61□□□□□ -0.55
CPNE3-205ENST00000522240 WISP2O76076 250 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 LYNP07948 512 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 PGA4P0DJD7 388 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 PGA3P0DJD8 388 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 DBTP11182 482 aaKnown RBP11.61□□□□□ -0.55
CPNE3-205ENST00000522240 GABRA1P14867 456 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 SLC2A5P22732 501 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 HTR1FP30939 366 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 SLC15A1P46059 708 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 NUDT6P53370 316 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 CLDN17P56750 224 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 SMN1Q16637 294 aaKnown RBP11.61□□□□□ -0.55
CPNE3-205ENST00000522240 ACSF3Q4G176 576 aaPredicted RBP11.61□□□□□ -0.55
CPNE3-205ENST00000522240 LCN1P1Q5VSP4 162 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 GTF2IRD2BQ6EKJ0 949 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 DNM1P34Q6PK57 102 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 GTF2IRD2Q86UP8 949 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 BPIFB6Q8NFQ5 453 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 OR2T4Q8NH00 348 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 ABHD3Q8WU67 409 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 IPCEF1Q8WWN9 437 aaPredicted RBP11.61□□□□□ -0.55
CPNE3-205ENST00000522240 RNF166Q96A37 237 aaPredicted RBP11.61□□□□□ -0.55
CPNE3-205ENST00000522240 SLC25A44Q96H78 314 aaPredicted RBP11.61□□□□□ -0.55
CPNE3-205ENST00000522240 HCAR1Q9BXC0 346 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 PRRG4Q9BZD6 226 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 RACGAP1Q9H0H5 632 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 GLRX2Q9NS18 164 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 MRPS18AQ9NVS2 196 aaKnown RBP11.61□□□□□ -0.55
CPNE3-205ENST00000522240 FKBP14Q9NWM8 211 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 H2AFY2Q9P0M6 372 aaPredicted RBP11.61□□□□□ -0.55
CPNE3-205ENST00000522240 WARS2Q9UGM6 360 aaKnown RBP11.61□□□□□ -0.55
CPNE3-205ENST00000522240 PSORS1C1Q9UIG5 152 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 ING1Q9UK53 422 aaPredicted RBP11.61□□□□□ -0.55
CPNE3-205ENST00000522240 PTPN13Q12923 2485 aa11.61□□□□□ -0.55
CPNE3-205ENST00000522240 SLC22A23A1A5C7 686 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 SLC35F4A4IF30 521 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 CCDC182A6NF36 153 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms