RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 PRO3102Q9H379 93 aa3.18□□□□□ -1.9
CTHRC1-204ENST00000520880 Q9H521 79 aa3.18□□□□□ -1.9
CTHRC1-204ENST00000520880 XKR8Q9H6D3 395 aa3.18□□□□□ -1.9
CTHRC1-204ENST00000520880 REEP4Q9H6H4 257 aa3.18□□□□□ -1.9
CTHRC1-204ENST00000520880 OPA3Q9H6K4 179 aa3.18□□□□□ -1.9
CTHRC1-204ENST00000520880 C8orf33Q9H7E9 229 aaPredicted RBP3.18□□□□□ -1.9
CTHRC1-204ENST00000520880 NT5DC2Q9H857 520 aa3.18□□□□□ -1.9
CTHRC1-204ENST00000520880 NTN4Q9HB63 628 aa3.18□□□□□ -1.9
CTHRC1-204ENST00000520880 GPN1Q9HCN4 374 aaPredicted RBP3.18□□□□□ -1.9
CTHRC1-204ENST00000520880 MYNNQ9NPC7 610 aa3.18□□□□□ -1.9
CTHRC1-204ENST00000520880 DCAF13Q9NV06 445 aaKnown RBP3.18□□□□□ -1.9
CTHRC1-204ENST00000520880 OLAHQ9NV23 265 aa3.18□□□□□ -1.9
CTHRC1-204ENST00000520880 UBAP1Q9NZ09 502 aa3.18□□□□□ -1.9
CTHRC1-204ENST00000520880 ZNF639Q9UID6 485 aa3.18□□□□□ -1.9
CTHRC1-204ENST00000520880 MMP17Q9ULZ9 603 aa3.18□□□□□ -1.9
CTHRC1-204ENST00000520880 CA5BQ9Y2D0 317 aa3.18□□□□□ -1.9
CTHRC1-204ENST00000520880 PTRH2Q9Y3E5 179 aaKnown RBP3.18□□□□□ -1.9
CTHRC1-204ENST00000520880 GMEB1Q9Y692 573 aa3.18□□□□□ -1.9
CTHRC1-204ENST00000520880 SCN2AQ99250 2005 aa3.18□□□□□ -1.9
CTHRC1-204ENST00000520880 SCN3AQ9NY46 2000 aa3.18□□□□□ -1.9
CTHRC1-204ENST00000520880 TNRC6BQ9UPQ9 1833 aaKnown RBP3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 NINQ8N4C6 2090 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 GNG14A0A1W2PPG7 69 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 hCG_1807616A0A1W2PRN6 198 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 TCRBV21S2A2A0A5A6 115 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 TRBC2A0A5B9 178 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 ANKDD1BA6NHY2 528 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 PDZK1P1A8MUH7 402 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 EVPLLA8MZ36 301 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 C4orf51C9J302 202 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 NPIPB9F8W1W9 429 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 RTCAO00442 366 aaKnown RBP3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 EI24O14681 340 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 HAT1O14929 419 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 CLOCKO15516 846 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 PHF1O43189 567 aaPredicted RBP3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 MBTPS2O43462 519 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 LCMT2O60294 686 aaKnown RBP3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 GALR3O60755 368 aaPredicted RBP3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 TBX19O60806 448 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 CPSF4O95639 269 aaKnown RBP3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 APBB3O95704 486 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 C6orf47O95873 294 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 SERPINA1P01009 418 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 IGLV3-19P01714 112 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 IGHV2-70P01814 119 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 SEMG1P04279 462 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 KLK1P06870 262 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 IL3P08700 152 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 GNAO1P09471 354 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 FAM58BPP0C7Q3 252 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 GP1BBP13224 206 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 GLULP15104 373 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 IL1RNP18510 177 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 HNRNPA2B1P22626 353 aaKnown RBP3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 PPIBP23284 216 aaKnown RBP3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 AK4P27144 223 aaPredicted RBP3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 SERPINB1P30740 379 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 PCGF2P35227 344 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 PTGER4P35408 488 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 MAGEA2P43356 314 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 RAB28P51157 221 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 TPMTP51580 245 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 CCR8P51685 355 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 CRYBA2P53672 197 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 HBA1P69905 142 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 CHRNB3Q05901 458 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 PRDX1Q06830 199 aaKnown RBP3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 C2orf80Q0P641 193 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 LRRC74AQ0VAA2 488 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 APOFQ13790 326 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 C16orf72Q14CZ0 275 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 RGNQ15493 299 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 SLC36A3Q495N2 470 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 LRRC23Q53EV4 343 aaPredicted RBP3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 EOGTQ5NDL2 527 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 CPTPQ5TA50 214 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 ANXA8L1Q5VT79 327 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 KHDRBS2Q5VWX1 349 aaKnown RBP3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 CFAP161Q6P656 301 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 ERICH5Q6P6B1 374 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 TBPL2Q6SJ96 375 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 ENPP7Q6UWV6 458 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 ABRAXAS1Q6UWZ7 409 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 Q6ZS52 159 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 ZNF621Q6ZSS3 439 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 NUP54Q7Z3B4 507 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 ZER1Q7Z7L7 766 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 ST13P4Q8IZP2 240 aaPredicted RBP3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 CLEC4FQ8N1N0 589 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 OR4A15Q8NGL6 344 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 OR2A1Q8NGT9 310 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 CCL4L1Q8NHW4 92 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 PNPT1Q8TCS8 783 aaKnown RBP3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 ZFP90Q8TF47 636 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 FAM3CQ92520 227 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 NCLNQ969V3 563 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 TMBIM1Q969X1 311 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 FAM162AQ96A26 154 aa3.17□□□□□ -1.9
CTHRC1-204ENST00000520880 SLAMF9Q96A28 289 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms