RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 OR6X1Q8NH79 312 aa10.72□□□□□ -0.69
CSMD1-205ENST00000519623 FGFBP3Q8TAT2 258 aa10.72□□□□□ -0.69
CSMD1-205ENST00000519623 ADAMTS16Q8TE57 1224 aa10.72□□□□□ -0.69
CSMD1-205ENST00000519623 UBASH3BQ8TF42 649 aa10.72□□□□□ -0.69
CSMD1-205ENST00000519623 MRPL24Q96A35 216 aaKnown RBP10.72□□□□□ -0.69
CSMD1-205ENST00000519623 TAMM41Q96BW9 452 aa10.72□□□□□ -0.69
CSMD1-205ENST00000519623 FOXB1Q99853 325 aa10.72□□□□□ -0.69
CSMD1-205ENST00000519623 ZNF426Q9BUY5 554 aa10.72□□□□□ -0.69
CSMD1-205ENST00000519623 REPIN1Q9BWE0 567 aaKnown RBP10.72□□□□□ -0.69
CSMD1-205ENST00000519623 MRPL37Q9BZE1 423 aaKnown RBP10.72□□□□□ -0.69
CSMD1-205ENST00000519623 ULBP2Q9BZM5 246 aa10.72□□□□□ -0.69
CSMD1-205ENST00000519623 PCDHAC1Q9H158 963 aa10.72□□□□□ -0.69
CSMD1-205ENST00000519623 DENND2DQ9H6A0 471 aaPredicted RBP10.72□□□□□ -0.69
CSMD1-205ENST00000519623 LYNX1G3V0Z9 82 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 ANGPT2O15123 496 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 OR6A2O95222 327 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 PATE4P0C8F1 98 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 LYNX1P0DP58 116 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 IL2RGP31785 369 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 PCGF2P35227 344 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 GLRXP35754 106 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 PTDSS1P48651 473 aaKnown RBP10.71□□□□□ -0.69
CSMD1-205ENST00000519623 CSNK1A1P48729 337 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 NFYCQ13952 458 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 FXNQ16595 210 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 TRMT5Q32P41 509 aaKnown RBP10.71□□□□□ -0.69
CSMD1-205ENST00000519623 TTC33Q6PID6 262 aaPredicted RBP10.71□□□□□ -0.69
CSMD1-205ENST00000519623 IL17RELQ6ZVW7 336 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 PIWIL3Q7Z3Z3 882 aaKnown RBP10.71□□□□□ -0.69
CSMD1-205ENST00000519623 PATL1Q86TB9 770 aaKnown RBP10.71□□□□□ -0.69
CSMD1-205ENST00000519623 LRP11Q86VZ4 500 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 SNX32Q86XE0 403 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 ZNF584Q8IVC4 421 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 SLC30A8Q8IWU4 369 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 OR10A6Q8NH74 314 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 PRSS27Q9BQR3 290 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 CHODLQ9H9P2 273 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 DYNLRB1Q9NP97 96 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 GLTPQ9NZD2 209 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 REV1Q9UBZ9 1251 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 SLC7A7Q9UM01 511 aa10.71□□□□□ -0.69
CSMD1-205ENST00000519623 TRAPPC13A5PLN9 417 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 HMGB1P1B2RPK0 211 aaPredicted RBP10.7□□□□□ -0.7
CSMD1-205ENST00000519623 FBP2O00757 339 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 SYNGR3O43761 229 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 EDF1O60869 148 aaKnown RBP10.7□□□□□ -0.7
CSMD1-205ENST00000519623 UBL3O95164 117 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 SERPINA5P05154 406 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 ERCC1P07992 297 aaPredicted RBP10.7□□□□□ -0.7
CSMD1-205ENST00000519623 ASAH2BP0C7U1 165 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 SRD5A1P18405 259 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 SEC24CP53992 1094 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 RAB39AQ14964 217 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 VMACQ2NL98 169 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 KRTAP24-1Q3LI83 254 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 METTL21CQ5VZV1 264 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 NANOGP8Q6NSW7 305 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 CCDC80Q76M96 950 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 SLC22A24Q8N4F4 322 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 VANGL1Q8TAA9 524 aaPredicted RBP10.7□□□□□ -0.7
CSMD1-205ENST00000519623 HPS1Q92902 700 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 SLC25A44Q96H78 314 aaPredicted RBP10.7□□□□□ -0.7
CSMD1-205ENST00000519623 C1orf159Q96HA4 380 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 MPP4Q96JB8 637 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 SLC19A3Q9BZV2 496 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 NANOGQ9H9S0 305 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 NPHS2Q9NP85 383 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 MEPEQ9NQ76 525 aaPredicted RBP10.7□□□□□ -0.7
CSMD1-205ENST00000519623 NANSQ9NR45 359 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 ZNF229Q9UJW7 825 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 TRIM33Q9UPN9 1127 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 SPEF1Q9Y4P9 236 aa10.7□□□□□ -0.7
CSMD1-205ENST00000519623 KPNA4O00629 521 aaPredicted RBP10.69□□□□□ -0.7
CSMD1-205ENST00000519623 DHHO43323 396 aa10.69□□□□□ -0.7
CSMD1-205ENST00000519623 RNF13O43567 381 aa10.69□□□□□ -0.7
CSMD1-205ENST00000519623 RAB36O95755 333 aa10.69□□□□□ -0.7
CSMD1-205ENST00000519623 PGA4P0DJD7 388 aa10.69□□□□□ -0.7
CSMD1-205ENST00000519623 PGA3P0DJD8 388 aa10.69□□□□□ -0.7
CSMD1-205ENST00000519623 OR8G3PP0DMU2 310 aa10.69□□□□□ -0.7
CSMD1-205ENST00000519623 COL8A2P25067 703 aa10.69□□□□□ -0.7
CSMD1-205ENST00000519623 CHN2P52757 468 aa10.69□□□□□ -0.7
CSMD1-205ENST00000519623 TRIP10Q15642 601 aa10.69□□□□□ -0.7
CSMD1-205ENST00000519623 HIST3H3Q16695 136 aa10.69□□□□□ -0.7
CSMD1-205ENST00000519623 ELFN2Q5R3F8 820 aa10.69□□□□□ -0.7
CSMD1-205ENST00000519623 HDXQ7Z353 690 aa10.69□□□□□ -0.7
CSMD1-205ENST00000519623 CALHM3Q86XJ0 350 aa10.69□□□□□ -0.7
CSMD1-205ENST00000519623 ZNF566Q969W8 418 aa10.69□□□□□ -0.7
CSMD1-205ENST00000519623 SH3GL3Q99963 347 aa10.69□□□□□ -0.7
CSMD1-205ENST00000519623 SYT3Q9BQG1 590 aa10.69□□□□□ -0.7
CSMD1-205ENST00000519623 TPK1Q9H3S4 243 aa10.69□□□□□ -0.7
CSMD1-205ENST00000519623 MS4A5Q9H3V2 200 aa10.69□□□□□ -0.7
CSMD1-205ENST00000519623 TMEM38BQ9NVV0 291 aa10.69□□□□□ -0.7
CSMD1-205ENST00000519623 MYEF2Q9P2K5 600 aaKnown RBP10.69□□□□□ -0.7
CSMD1-205ENST00000519623 FBXL3Q9UKT7 428 aa10.69□□□□□ -0.7
CSMD1-205ENST00000519623 A0A0G2JND7 137 aa10.68□□□□□ -0.7
CSMD1-205ENST00000519623 M0R233 179 aa10.68□□□□□ -0.7
CSMD1-205ENST00000519623 BCL10O95999 233 aa10.68□□□□□ -0.7
CSMD1-205ENST00000519623 HPXP02790 462 aa10.68□□□□□ -0.7
CSMD1-205ENST00000519623 HIST1H2ABP04908 130 aa10.68□□□□□ -0.7
CSMD1-205ENST00000519623 QDPRP09417 244 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms