RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 ASPNQ9BXN1 380 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 CRLF2Q9HC73 371 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 OBP2BQ9NPH6 170 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 MED29Q9NX70 200 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 B3GNT2Q9NY97 397 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 TAGLN3Q9UI15 199 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 RIMS3Q9UJD0 308 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 POU2F3Q9UKI9 436 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 NOX1Q9Y5S8 564 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 ATP23Q9Y6H3 246 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 ELOVL7A1L3X0 281 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 HTR3EA5X5Y0 456 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 ZNF503-AS2A6NEH8 195 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 ZNF726A6NNF4 738 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 C11orf98E9PRG8 122 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 M0R3G1 203 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 SLC22A2O15244 555 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 CCDC22O60826 627 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 IGLV1-44P01699 117 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 ASAH2BP0C7U1 165 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 ADORA3P0DMS8 318 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 ZNF3P17036 446 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 FUT1P19526 365 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 AHCYP23526 432 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 HAAOP46952 286 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 ETV1P50549 477 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 SEC24CP53992 1094 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 UBE2NP61088 152 aaKnown RBP8.13□□□□□ -1.11
HDAC3-215ENST00000519474 SELENOWP63302 87 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 CD83Q01151 205 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 IL1RL1Q01638 556 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 PUDPQ08623 228 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 PIN1Q13526 163 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-215ENST00000519474 ZNF74Q16587 644 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 NDUFA5Q16718 116 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 SWI5Q1ZZU3 235 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 C3orf36Q3SXR2 165 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 CYBRD1Q53TN4 286 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 ZNF544Q6NX49 715 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 C8orf82Q6P1X6 216 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-215ENST00000519474 MZT2AQ6P582 158 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 LRFN4Q6PJG9 635 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 ZNF600Q6ZNG1 722 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 CCDC121Q6ZUS5 278 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 SLC46A3Q7Z3Q1 461 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 MICU2Q8IYU8 434 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 FBXL14Q8N1E6 418 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 MUC15Q8N387 334 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 PROX1Q92786 737 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 RCN3Q96D15 328 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 ZNF75AQ96N20 296 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 SLC38A2Q96QD8 506 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 ELAC2Q9BQ52 826 aaKnown RBP8.13□□□□□ -1.11
HDAC3-215ENST00000519474 REG4Q9BYZ8 158 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 ALG2Q9H553 416 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 SEC61A2Q9H9S3 476 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 FKRPQ9H9S5 495 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 FAIMQ9NVQ4 179 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 PFDN2Q9UHV9 154 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 BAG5Q9UL15 447 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 CAPN7Q9Y6W3 813 aa8.13□□□□□ -1.11
HDAC3-215ENST00000519474 ZNF99A8MXY4 864 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-215ENST00000519474 FAM220BPB1ANY3 271 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 ATP6V1G2-DDX39BF2Z307 99 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 IFNA14P01570 189 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 IGKV3-15P01624 115 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 MT-ND1P03886 318 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 CELA3BP08861 270 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 CECR9P0C854 216 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 IFNGR1P15260 489 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 CALCRP30988 508 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 BIDP55957 195 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 MRPS15P82914 257 aaKnown RBP8.12□□□□□ -1.11
HDAC3-215ENST00000519474 NAAAQ02083 359 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 POU3F1Q03052 451 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-215ENST00000519474 HGFACQ04756 655 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 LAPTM4AQ15012 233 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 SNCBQ16143 134 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 CEP78Q5JTW2 689 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 KLHL24Q6TFL4 600 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 SLC35D2Q76EJ3 337 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 ZNF627Q7L945 461 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 MYPOPQ86VE0 399 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-215ENST00000519474 CCDC36Q8IYA8 594 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 OR2T12Q8NG77 320 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 OR10H5Q8NGA6 315 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 OR6X1Q8NH79 312 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 LIPHQ8WWY8 451 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 TMEM54Q969K7 222 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 HS6ST2Q96MM7 605 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 TSC22D3Q99576 134 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 HOPXQ9BPY8 73 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-215ENST00000519474 CACNG6Q9BXT2 260 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 SLC19A3Q9BZV2 496 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 MYLK2Q9H1R3 596 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 EFCAB1Q9HAE3 211 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 NANSQ9NR45 359 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 MBD2Q9UBB5 411 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 A4GNTQ9UNA3 340 aa8.12□□□□□ -1.11
HDAC3-215ENST00000519474 SNX13Q9Y5W8 968 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms