RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 GMNCA6NCL1 334 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 FRG2CA6NGY1 282 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 NPIPA5E9PKD4 350 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 NR5A2O00482 541 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 RNASET2O00584 256 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 RFXANKO14593 260 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 ABCD4O14678 606 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 TFECO14948 347 aaPredicted RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 SLC22A2O15244 555 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 ACOX3O15254 700 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 ZNF264O43296 627 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 ZNF208O43345 1280 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 NME2P1O60361 137 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 CDC40O60508 579 aaKnown RBP eCLIP2.47□□□□□ -2.01
SKP1-204ENST00000517691 ZNF354AO60765 605 aaPredicted RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 TRAPPC6AO75865 159 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 C1QL1O75973 258 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 NADKO95544 446 aaPredicted RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 TGM6O95932 706 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 FSHBP01225 129 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 CRYABP02511 175 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 HMGN2P05204 90 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 ALOX5P09917 674 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 CCL3P10147 92 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 B4GALT1P15291 398 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 UQCRC2P22695 453 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 IL12AP29459 219 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 PIGAP37287 484 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 SLC1A3P43003 542 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 RPS5P46782 204 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 TMED10P49755 219 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 BLVRAP53004 296 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 SLURP1P55000 103 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 KCNK10P57789 538 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 LINC00310P59036 64 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 PPIAP62937 165 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 GNGT1P63211 74 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 HBA1P69905 142 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 MRPS22P82650 360 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 HSF2Q03933 536 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 SPOCK1Q08629 439 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 IL18Q14116 193 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 ZNF791Q3KP31 576 aaPredicted RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 ALKBH6Q3KRA9 238 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 TIGD2Q4W5G0 525 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 FAM98BQ52LJ0 330 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 TNFAIP8L2Q6P589 184 aaPredicted RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 ANKRD16Q6P6B7 361 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 C6orf120Q7Z4R8 191 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 GALNT10Q86SR1 603 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 UBQLNLQ8IYU4 475 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 DND1Q8IYX4 353 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 SLC34A3Q8N130 599 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 CPSF7Q8N684 471 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 BCORP1Q8N888 145 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 COX18Q8N8Q8 333 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 ZNF441Q8N8Z8 693 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 ASCC1Q8N9N2 400 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 CDRT4Q8N9R6 151 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 SCAIQ8N9R8 606 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 SYT8Q8NBV8 401 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 MDS2Q8NDY4 140 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 OR4N2Q8NGD1 307 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 OR8J2Q8NGG1 315 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 OR56A1Q8NGH5 318 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 OR9I1Q8NGQ6 314 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 XAGE5Q8WWM1 108 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 PIK3R3Q92569 461 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 OSTF1Q92882 214 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 SGK3Q96BR1 496 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 RMND5BQ96G75 393 aaPredicted RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 MARS2Q96GW9 593 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 ITCHQ96J02 903 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 TMEM68Q96MH6 324 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 VSTM2LQ96N03 204 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 COL21A1Q96P44 957 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 MS4A4EQ96PG1 132 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 BTBD9Q96Q07 612 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 FYTTD1Q96QD9 318 aaKnown RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 FAM173AQ9BQD7 235 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 CPPED1Q9BRF8 314 aaPredicted RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 SLC35A5Q9BS91 424 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 DOHHQ9BU89 302 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 DPCDQ9BVM2 203 aaPredicted RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 DEFB127Q9H1M4 99 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 FN3KQ9H479 309 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 TMEM231Q9H6L2 316 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 IL1RL2Q9HB29 575 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 SDR39U1Q9NRG7 319 aaPredicted RBP2.47□□□□□ -2.01
SKP1-204ENST00000517691 NUDT15Q9NV35 164 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 ASF1BQ9NVP2 202 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 SLCO1C1Q9NYB5 712 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 IL20Q9NYY1 176 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 KLRF1Q9NZS2 232 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 OAZ3Q9UMX2 235 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 NPIPA1Q9UND3 350 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 RNF24Q9Y225 148 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 PRELID1Q9Y255 219 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 FAM96BQ9Y3D0 163 aa2.47□□□□□ -2.01
SKP1-204ENST00000517691 TNFRSF18Q9Y5U5 241 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms