RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 PYGO2Q9BRQ0 406 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 RNF167Q9H6Y7 350 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 PTGES2Q9H7Z7 377 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 MRPL22Q9NWU5 206 aaKnown RBP2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 ABCD2Q9UBJ2 740 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 SHPKQ9UHJ6 478 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 NAP1L2Q9ULW6 460 aaPredicted RBP2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 SAR1BQ9Y6B6 198 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 LRRK1Q38SD2 2015 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 A0A0J9YYE9 177 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 ZNF726A6NNF4 738 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 TNFSF11O14788 317 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 AIM2O14862 343 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 EIF3HO15372 352 aaKnown RBP eCLIP2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 SPOPO43791 374 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 BBOX1O75936 387 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 TRBC1P01850 177 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 ANXA5P08758 320 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 MYL2P10916 166 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 TDGF1P13385 188 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 GSTM3P21266 225 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 ATP6V1B2P21281 511 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 MSR1P21757 451 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 GTF2E2P29084 291 aaKnown RBP2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 HMOX2P30519 316 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 TNFSF9P41273 254 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 RGRP47804 291 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 UQCRFS1P47985 274 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 TDGF1P3P51864 188 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 YWHAGP61981 247 aaKnown RBP eCLIP2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 IGLV3-21P80748 117 aaPredicted RBP2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 TMED1Q13445 227 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 DOC2AQ14183 400 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 KIAA0087Q14695 138 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 SF3A2Q15428 464 aaKnown RBP2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 KYAT1Q16773 422 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 HIKESHIQ53FT3 197 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 GPR157Q5UAW9 335 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 RSBN1Q5VWQ0 802 aaPredicted RBP2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 TWF2Q6IBS0 349 aaKnown RBP2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 H3F3CQ6NXT2 135 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 TTC23LQ6PF05 361 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 C19orf35Q6ZS72 473 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 ZNF571Q7Z3V5 609 aaPredicted RBP2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 HDDC2Q7Z4H3 204 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 TMEM179BQ7Z7N9 219 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 PUSL1Q8N0Z8 303 aaKnown RBP2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 LIX1Q8N485 282 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 ZADH2Q8N4Q0 377 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 JAGN1Q8N5M9 183 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 ZNF321PQ8N8H1 164 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 ZNF740Q8NDX6 193 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 OR10G9Q8NGN4 311 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 OR9G1Q8NH87 305 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 UCN3Q969E3 161 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 TMEM54Q969K7 222 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 NAF1Q96HR8 494 aaKnown RBP2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 TMEM101Q96IK0 257 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 JSRP1Q96MG2 331 aaPredicted RBP2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 PLEKHF1Q96S99 279 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 SLC29A1Q99808 456 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 OR11A1Q9GZK7 315 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 BLZF1Q9H2G9 400 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 CLSTN2Q9H4D0 955 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 RGCCQ9H4X1 137 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 CYP3A43Q9HB55 503 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 CCL28Q9NRJ3 127 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 UXTQ9UBK9 157 aaPredicted RBP2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 PACSIN2Q9UNF0 486 aaPredicted RBP2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 ING4Q9UNL4 249 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 VSIG4Q9Y279 399 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 SLC17A4Q9Y2C5 497 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 ZNF256Q9Y2P7 627 aaPredicted RBP2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 MMP24Q9Y5R2 645 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 MROH7-TTC4A0A0A0MT08 1334 aa2.38□□□□□ -2.03
RNU6-840P-201ENST00000517275 PLEKHG1Q9ULL1 1385 aa2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 GLYATL1P3A0A0U1RQE8 302 aa2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 RBMY1BA6NDE4 496 aaKnown RBP2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 RBMY1EA6NEQ0 496 aaKnown RBP2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 USP27XA6NNY8 438 aa2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 BOLA2-SMG1P6H3BVE0 249 aa2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 LSM1O15116 133 aaKnown RBP2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 HLA-HP01893 362 aa2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 FGGP02679 453 aa2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 TACSTD2P09758 323 aa2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 RBMY1DP0C7P1 496 aaKnown RBP2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 CHTF8P0CG12 524 aa2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 RBMY1A1P0DJD3 496 aaKnown RBP2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 IGHV3-43DP0DP04 118 aa2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 ICAM2P13598 275 aa2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 EIF2S2P20042 333 aaKnown RBP2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 BCKDHBP21953 392 aa2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 COX7A1P24310 79 aa2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 VDAC2P45880 294 aaPredicted RBP2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 APOC4P55056 127 aa2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 IRF8Q02556 426 aa2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 RAD51Q06609 339 aa2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 TTC19Q6DKK2 380 aaPredicted RBP2.37□□□□□ -2.03
RNU6-840P-201ENST00000517275 ZNF774Q6NX45 483 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms