RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 TAS2R5Q9NYW4 299 aa11.48□□□□□ -0.57
PFDN1-206ENST00000514611 FZR1Q9UM11 496 aa11.48□□□□□ -0.57
PFDN1-206ENST00000514611 TRIM33Q9UPN9 1127 aa11.48□□□□□ -0.57
PFDN1-206ENST00000514611 CMAHPQ9Y471 501 aa11.48□□□□□ -0.57
PFDN1-206ENST00000514611 FBN3Q75N90 2809 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 A0A0G2JND7 137 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 RNF13O43567 381 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 EDF1O60869 148 aaKnown RBP11.47□□□□□ -0.57
PFDN1-206ENST00000514611 OR6A2O95222 327 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 RAB36O95755 333 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 ERCC1P07992 297 aaPredicted RBP11.47□□□□□ -0.57
PFDN1-206ENST00000514611 ZNF35P13682 527 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 SRD5A1P18405 259 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 GZMMP51124 257 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 RAB1AP62820 205 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 RAB39AQ14964 217 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 TRIP10Q15642 601 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 KRTAP24-1Q3LI83 254 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 TTC33Q6PID6 262 aaPredicted RBP11.47□□□□□ -0.57
PFDN1-206ENST00000514611 SLC35D2Q76EJ3 337 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 PATL1Q86TB9 770 aaKnown RBP11.47□□□□□ -0.57
PFDN1-206ENST00000514611 LRP11Q86VZ4 500 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 ZNF584Q8IVC4 421 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 ZNF540Q8NDQ6 660 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 TMEM54Q969K7 222 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 SNX18Q96RF0 628 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 SYT3Q9BQG1 590 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 ZNF426Q9BUY5 554 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 NANSQ9NR45 359 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 GLTPQ9NZD2 209 aa11.47□□□□□ -0.57
PFDN1-206ENST00000514611 MYEF2Q9P2K5 600 aaKnown RBP11.47□□□□□ -0.57
PFDN1-206ENST00000514611 FBXO9Q9UK97 447 aaPredicted RBP11.47□□□□□ -0.57
PFDN1-206ENST00000514611 YLPM1P49750 1951 aaKnown RBP11.47□□□□□ -0.57
PFDN1-206ENST00000514611 COL6A5A8TX70 2615 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 TRAPPC13A5PLN9 417 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 VSTM5A8MXK1 200 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 FBP2O00757 339 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 LILRA1O75019 489 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 UBL3O95164 117 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 TGFAP01135 160 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 UMPSP11172 480 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 TCN1P20061 433 aaPredicted RBP11.46□□□□□ -0.57
PFDN1-206ENST00000514611 TNFRSF1BP20333 461 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 GIFP27352 417 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 ALDH3B1P43353 468 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 MAD2L1BPQ15013 274 aaPredicted RBP11.46□□□□□ -0.57
PFDN1-206ENST00000514611 VMACQ2NL98 169 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 TRMT5Q32P41 509 aaKnown RBP11.46□□□□□ -0.57
PFDN1-206ENST00000514611 SNX32Q86XE0 403 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 SLC30A8Q8IWU4 369 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 SKA3Q8IX90 412 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 ZNF786Q8N393 782 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 OR6X1Q8NH79 312 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 PFN4Q8NHR9 129 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 SLC26A7Q8TE54 656 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 UBASH3BQ8TF42 649 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 ZNF566Q969W8 418 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 PRSS27Q9BQR3 290 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 PCDHAC1Q9H158 963 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 MEPEQ9NQ76 525 aaPredicted RBP11.46□□□□□ -0.57
PFDN1-206ENST00000514611 ZNF229Q9UJW7 825 aa11.46□□□□□ -0.57
PFDN1-206ENST00000514611 MXRA5Q9NR99 2828 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 M0R233 179 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 FXYD1O00168 92 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 SYNGR3O43761 229 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 SHOX2O60902 331 aaPredicted RBP11.45□□□□□ -0.58
PFDN1-206ENST00000514611 TACSTD2P09758 323 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 ASAH2BP0C7U1 165 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 PGA4P0DJD7 388 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 PGA3P0DJD8 388 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 APEX1P27695 318 aaKnown RBP11.45□□□□□ -0.58
PFDN1-206ENST00000514611 GLRXP35754 106 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 SEC24CP53992 1094 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 GALK2Q01415 458 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 RUNX1T1Q06455 604 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 ZP4Q12836 540 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 SF3A3Q12874 501 aaKnown RBP eCLIP11.45□□□□□ -0.58
PFDN1-206ENST00000514611 RIN1Q13671 783 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 CCNIQ14094 377 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 FXNQ16595 210 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 CR1LQ2VPA4 569 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 RABL3Q5HYI8 236 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 INTS11Q5TA45 600 aaKnown RBP11.45□□□□□ -0.58
PFDN1-206ENST00000514611 GKAP1Q5VSY0 366 aaPredicted RBP11.45□□□□□ -0.58
PFDN1-206ENST00000514611 LRFN4Q6PJG9 635 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 NANOGNBQ7Z5D8 188 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 SLC22A24Q8N4F4 322 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 TSPEARQ8WU66 669 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 SLC25A44Q96H78 314 aaPredicted RBP11.45□□□□□ -0.58
PFDN1-206ENST00000514611 SH3GL3Q99963 347 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 TMEM120AQ9BXJ8 343 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 TMEM38BQ9NVV0 291 aa11.45□□□□□ -0.58
PFDN1-206ENST00000514611 SASH3O75995 380 aa11.44□□□□□ -0.58
PFDN1-206ENST00000514611 HPXP02790 462 aa11.44□□□□□ -0.58
PFDN1-206ENST00000514611 CCL2P13500 99 aa11.44□□□□□ -0.58
PFDN1-206ENST00000514611 CHN2P52757 468 aa11.44□□□□□ -0.58
PFDN1-206ENST00000514611 UGT2B15P54855 530 aa11.44□□□□□ -0.58
PFDN1-206ENST00000514611 MYBPC1Q00872 1141 aa11.44□□□□□ -0.58
PFDN1-206ENST00000514611 ALKBH6Q3KRA9 238 aa11.44□□□□□ -0.58
PFDN1-206ENST00000514611 ELFN2Q5R3F8 820 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms