RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 ACVR1BP36896 505 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 BIDP55957 195 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 CLRN1P58418 232 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 CDC42P60953 191 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 CDK5Q00535 292 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 ITGADQ13349 1161 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 TOP3AQ13472 1001 aaPredicted RBP9.01□□□□□ -0.97
NEDD9-214ENST00000513989 FHL1Q13642 323 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 SNAPC1Q16533 368 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 ZIK1Q3SY52 487 aaPredicted RBP9.01□□□□□ -0.97
NEDD9-214ENST00000513989 THEM4Q5T1C6 240 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 NIPAL3Q6P499 406 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 THSD4Q6ZMP0 1018 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 ADCK1Q86TW2 530 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 IGFN1Q86VF2 1251 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 FJX1Q86VR8 437 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 KIF18BQ86Y91 864 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 DEPDC4Q8N2C3 294 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 UBE2J2Q8N2K1 259 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 GPR137CQ8N3F9 429 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 DHRSXQ8N5I4 330 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 ARIH2OSQ8N7S6 290 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 ZIC4Q8N9L1 334 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 LRRC75AQ8NAA5 344 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 POMGNT2Q8NAT1 580 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 OR6N1Q8NGY5 312 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 TRUB1Q8WWH5 349 aaKnown RBP9.01□□□□□ -0.97
NEDD9-214ENST00000513989 LRRC46Q96FV0 321 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 TXNDC15Q96J42 360 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 ALG12Q9BV10 488 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 GABARAPL3Q9BY60 117 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 TOR3AQ9H497 397 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 PLSCR4Q9NRQ2 329 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 H2AFY2Q9P0M6 372 aaPredicted RBP9.01□□□□□ -0.97
NEDD9-214ENST00000513989 PROCRQ9UNN8 238 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 C2CD3Q4AC94 2353 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 DNAJC13O75165 2243 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 MTORP42345 2549 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 ZFHX3Q15911 3703 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 BHLHE40O14503 412 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 SLC16A6O15403 523 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 TRAF3IP2O43734 574 aaPredicted RBP9□□□□□ -0.97
NEDD9-214ENST00000513989 MPZL2O60487 215 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 ZG16O60844 167 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 PPP1R3DO95685 299 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 SNAP29O95721 258 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 IGFBP1P08833 259 aaPredicted RBP9□□□□□ -0.97
NEDD9-214ENST00000513989 ZNF3P17036 446 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 KLK2P20151 261 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 AGTR1P30556 359 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 KIR2DL2P43627 348 aaPredicted RBP9□□□□□ -0.97
NEDD9-214ENST00000513989 CSNK1A1P48729 337 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 SIRPAP78324 504 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 CAMK2DQ13557 499 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 PGGHGQ32M88 737 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 ANKRD34AQ69YU3 496 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 PLXDC2Q6UX71 529 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 SEM1Q6ZVN7 128 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 GCNT2Q8N0V5 402 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 NRG4Q8WWG1 115 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 CYGBQ8WWM9 190 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 ASB10Q8WXI3 467 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 ZNF385AQ96PM9 386 aaKnown RBP9□□□□□ -0.97
NEDD9-214ENST00000513989 TSPAN32Q96QS1 320 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 DMRTA2Q96SC8 542 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 APOL4Q9BPW4 351 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 EMC6Q9BV81 110 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 GRIP2Q9C0E4 1043 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 ENKD1Q9H0I2 346 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 C12orf49Q9H741 205 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 SLC25A19Q9HC21 320 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 FAM118AQ9NWS6 357 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 ASB6Q9NWX5 421 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 IMPAD1Q9NX62 359 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 MED29Q9NX70 200 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 TVP23BQ9NYZ1 205 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 GMPPBQ9Y5P6 360 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 ZNF407Q9C0G0 2248 aa9□□□□□ -0.97
NEDD9-214ENST00000513989 MED13LQ71F56 2210 aa8.99□□□□□ -0.97
NEDD9-214ENST00000513989 SPG11Q96JI7 2443 aa8.99□□□□□ -0.97
NEDD9-214ENST00000513989 A0A0G2JNJ9 132 aa8.99□□□□□ -0.97
NEDD9-214ENST00000513989 TEX13CA0A0J9YWL9 993 aa8.99□□□□□ -0.97
NEDD9-214ENST00000513989 PRSS37A4D1T9 235 aa8.99□□□□□ -0.97
NEDD9-214ENST00000513989 SNTNA6NMZ2 147 aa8.99□□□□□ -0.97
NEDD9-214ENST00000513989 ZAR1LA6NP61 321 aa8.99□□□□□ -0.97
NEDD9-214ENST00000513989 H0YAE9 185 aa8.99□□□□□ -0.97
NEDD9-214ENST00000513989 SMNDC1O75940 238 aaKnown RBP eCLIP8.99□□□□□ -0.97
NEDD9-214ENST00000513989 ZNF432O94892 652 aa8.99□□□□□ -0.97
NEDD9-214ENST00000513989 TOXO94900 526 aa8.99□□□□□ -0.97
NEDD9-214ENST00000513989 TP53P04637 393 aaPredicted RBP8.99□□□□□ -0.97
NEDD9-214ENST00000513989 CD8BP10966 210 aa8.99□□□□□ -0.97
NEDD9-214ENST00000513989 HIST1H1CP16403 213 aaKnown RBP8.99□□□□□ -0.97
NEDD9-214ENST00000513989 CRABP1P29762 137 aa8.99□□□□□ -0.97
NEDD9-214ENST00000513989 CHRNB4P30926 498 aa8.99□□□□□ -0.97
NEDD9-214ENST00000513989 OR3A2P47893 321 aa8.99□□□□□ -0.97
NEDD9-214ENST00000513989 SELENOPP49908 381 aa8.99□□□□□ -0.97
NEDD9-214ENST00000513989 FXYD6P3P58550 94 aa8.99□□□□□ -0.97
NEDD9-214ENST00000513989 TGFBR3Q03167 851 aa8.99□□□□□ -0.97
NEDD9-214ENST00000513989 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.99□□□□□ -0.97
NEDD9-214ENST00000513989 CD47Q08722 323 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms