RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 FGFBP3Q8TAT2 258 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 PNPT1Q8TCS8 783 aaKnown RBP9.25□□□□□ -0.93
DDX41-216ENST00000513562 C11orf40Q8WZ69 217 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 TAAR8Q969N4 342 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 TESCQ96BS2 214 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 CCDC115Q96NT0 180 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 RBM4BQ9BQ04 359 aaKnown RBP9.25□□□□□ -0.93
DDX41-216ENST00000513562 EMC6Q9BV81 110 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 RSPO3Q9BXY4 272 aaPredicted RBP9.25□□□□□ -0.93
DDX41-216ENST00000513562 ULBP2Q9BZM5 246 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 TCF7L2Q9NQB0 619 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 ZNF443Q9Y2A4 671 aaPredicted RBP9.25□□□□□ -0.93
DDX41-216ENST00000513562 CHST2Q9Y4C5 530 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 FAM181BA6NEQ2 426 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 A8MXK9 166 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 MS4A18H0YCH9 400 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 TM9SF1O15321 606 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 MFN2O95140 757 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 SNAP29O95721 258 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 IGHV1-46P01743 117 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 IGHV3-13P01766 116 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 LCKP06239 509 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 OR8G3PP0DMU2 310 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 IGHV4-38-2P0DP08 117 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 CCL2P13500 99 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 KRT4P19013 534 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 ZNF81P51508 661 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 GLO1Q04760 184 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 DPY19L1Q2PZI1 675 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 MS4A18Q3C1V0 323 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 SPANXN4Q5MJ08 99 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 COX20Q5RI15 118 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 OLFML2AQ68BL7 652 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 ASPHD2Q6ICH7 369 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 C5orf46Q6UWT4 87 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 NHLRC1Q6VVB1 395 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 PIWIL3Q7Z3Z3 882 aaKnown RBP9.24□□□□□ -0.93
DDX41-216ENST00000513562 LRRC34Q8IZ02 419 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 C4orf33Q8N1A6 199 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 SLC38A4Q969I6 547 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 UBE2FQ969M7 185 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 SLC41A3Q96GZ6 507 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 ZIM3Q96PE6 472 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 TXLNGYQ9BZA5 131 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 BCL2L14Q9BZR8 327 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 OR51B6Q9H340 312 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 C12orf10Q9HB07 376 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 NPHS2Q9NP85 383 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 KLHL14Q9P2G3 628 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 BTNL2Q9UIR0 455 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 GPR45Q9Y5Y3 372 aa9.24□□□□□ -0.93
DDX41-216ENST00000513562 SOX21Q9Y651 276 aaPredicted RBP9.24□□□□□ -0.93
DDX41-216ENST00000513562 IGKV1D-42A0A075B6H8 117 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 TRAV36DV7A0A075B6V5 113 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 A0A087WUJ7 227 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 MDFIC2A0A1B0GVS7 189 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 CCDC154A6NI56 674 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 HOXA3O43365 443 aaPredicted RBP9.23□□□□□ -0.93
DDX41-216ENST00000513562 NDUFA7O95182 113 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 GPANK1O95872 356 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 PLATP00750 562 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 NGFP01138 241 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 IGHV2-70P01814 119 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 PPIAL4GP0DN37 164 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 DRD4P21917 467 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 SERPINB5P36952 375 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 MMP15P51511 669 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 UCP2P55851 309 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 KRTAP10-3P60369 221 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 RELBQ01201 579 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 PMS2P3Q13401 168 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 LARS2Q15031 903 aaKnown RBP9.23□□□□□ -0.93
DDX41-216ENST00000513562 WHAMMP3Q1A5X7 153 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 NET1Q7Z628 596 aaPredicted RBP9.23□□□□□ -0.93
DDX41-216ENST00000513562 JAZF1Q86VZ6 243 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 PARP8Q8N3A8 854 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 SLC22A24Q8N4F4 322 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 TRIML2Q8N7C3 387 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 SCAIQ8N9R8 606 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 CPEB3Q8NE35 698 aaKnown RBP9.23□□□□□ -0.93
DDX41-216ENST00000513562 BHLHE22Q8NFJ8 381 aaPredicted RBP9.23□□□□□ -0.93
DDX41-216ENST00000513562 OR52E2Q8NGJ4 325 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 OR6N1Q8NGY5 312 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 TXNDC15Q96J42 360 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 SPATA9Q9BWV2 254 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 C1orf198Q9H425 327 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 CDH20Q9HBT6 801 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 MKS1Q9NXB0 559 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 C1RLQ9NZP8 487 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 P2RX2Q9UBL9 471 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 NPTNQ9Y639 398 aa9.23□□□□□ -0.93
DDX41-216ENST00000513562 CLPSL1A2RUU4 121 aa9.22□□□□□ -0.93
DDX41-216ENST00000513562 ZSCAN5BA6NJL1 495 aa9.22□□□□□ -0.93
DDX41-216ENST00000513562 SLC22A31A6NKX4 558 aa9.22□□□□□ -0.93
DDX41-216ENST00000513562 ZNF726A6NNF4 738 aa9.22□□□□□ -0.93
DDX41-216ENST00000513562 SRRM5B3KS81 715 aa9.22□□□□□ -0.93
DDX41-216ENST00000513562 E9PBE3 544 aa9.22□□□□□ -0.93
DDX41-216ENST00000513562 SPRY3O43610 288 aa9.22□□□□□ -0.93
DDX41-216ENST00000513562 ENTPD5O75356 428 aa9.22□□□□□ -0.93
DDX41-216ENST00000513562 SHBGP04278 402 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms