RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 MED29Q9NX70 200 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 SLC25A37Q9NYZ2 338 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 LEF1Q9UJU2 399 aaPredicted RBP11.9□□□□□ -0.5
SPCS3-204ENST00000513139 PPIAL4AQ9Y536 164 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 CORINQ9Y5Q5 1042 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 DSPPQ9NZW4 1301 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 PRAMEF27A3QJZ7 478 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 ZNF99A8MXY4 864 aaPredicted RBP11.89□□□□□ -0.51
SPCS3-204ENST00000513139 SLC22A2O15244 555 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 NPIPB7O75200 414 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 ZCCHC18P0CG32 403 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 COX4I1P13073 169 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 IL7RP16871 459 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 ZNF14P17017 642 aaPredicted RBP11.89□□□□□ -0.51
SPCS3-204ENST00000513139 ZNF43P17038 809 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 HOXB9P17482 250 aaPredicted RBP11.89□□□□□ -0.51
SPCS3-204ENST00000513139 RPS4Y1P22090 263 aaKnown RBP11.89□□□□□ -0.51
SPCS3-204ENST00000513139 CAPZA2P47755 286 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 CLDN17P56750 224 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 IL13RA1P78552 427 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 PRR20EP86478 221 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 PRR20CP86479 221 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 PRR20DP86480 221 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 PRR20BP86481 221 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 PRR20AP86496 221 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 CYLC2Q14093 348 aaPredicted RBP11.89□□□□□ -0.51
SPCS3-204ENST00000513139 FXNQ16595 210 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 COX20Q5RI15 118 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 MRPL2Q5T653 305 aaKnown RBP11.89□□□□□ -0.51
SPCS3-204ENST00000513139 C1orf140Q5VVS0 124 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 RNF130Q86XS8 419 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 TRIML2Q8N7C3 387 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 MFSD8Q8NHS3 518 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 TSPEARQ8WU66 669 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 LRRC58Q96CX6 371 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 ZNF837Q96EG3 531 aaPredicted RBP11.89□□□□□ -0.51
SPCS3-204ENST00000513139 NEURL3Q96EH8 262 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 ZNF75AQ96N20 296 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 SLC38A1Q9H2H9 487 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 C7orf69Q9H7B7 122 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 VAPAQ9P0L0 249 aa11.89□□□□□ -0.51
SPCS3-204ENST00000513139 HMGN4O00479 90 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 DCTN3O75935 186 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 IGHV2-5P01817 119 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 DBIP07108 87 aaKnown RBP11.88□□□□□ -0.51
SPCS3-204ENST00000513139 TXNL4AP83876 142 aaKnown RBP11.88□□□□□ -0.51
SPCS3-204ENST00000513139 GALK2Q01415 458 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 BNIP2Q12982 314 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 NFYCQ13952 458 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 MAD2L1BPQ15013 274 aaPredicted RBP11.88□□□□□ -0.51
SPCS3-204ENST00000513139 MAPRE2Q15555 327 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 GSG1Q2KHT4 349 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 LRIF1Q5T3J3 769 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 WBP2NLQ6ICG8 309 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 LRRC74BQ6ZQY2 392 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 DOK3Q7L591 496 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 ZNF627Q7L945 461 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 LRP11Q86VZ4 500 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 LSRQ86X29 649 aaPredicted RBP11.88□□□□□ -0.51
SPCS3-204ENST00000513139 DPP10Q8N608 796 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 FITM2Q8N6M3 262 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 PIK3C3Q8NEB9 887 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 STK35Q8TDR2 534 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 RCN3Q96D15 328 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 OXGR1Q96P68 337 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 TPT1P8Q9HAU6 139 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 MRGBPQ9NV56 204 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 MYEF2Q9P2K5 600 aaKnown RBP11.88□□□□□ -0.51
SPCS3-204ENST00000513139 OPN4Q9UHM6 478 aa11.88□□□□□ -0.51
SPCS3-204ENST00000513139 TANC2Q9HCD6 1990 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 TRBV5-3A0A0A0MS03 114 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 FTCDNL1E5RQL4 147 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 CLIC1O00299 241 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 MRASO14807 208 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 FZD7O75084 574 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 PNMTP11086 282 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 NAT2P11245 290 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 ACAA2P42765 397 aaKnown RBP11.87□□□□□ -0.51
SPCS3-204ENST00000513139 MVDP53602 400 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 COPZ1P61923 177 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 CBX1P83916 185 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 TEKQ02763 1124 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 PCGF3Q3KNV8 242 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 DHDDSQ86SQ9 333 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 SIGLECL1Q8N7X8 197 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 RP9Q8TA86 221 aaKnown RBP11.87□□□□□ -0.51
SPCS3-204ENST00000513139 C22orf15Q8WYQ4 148 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 GPA33Q99795 319 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 IKZF5Q9H5V7 419 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 ARL8BQ9NVJ2 186 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 PGPEP1Q9NXJ5 209 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 NKIRAS2Q9NYR9 191 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.87□□□□□ -0.51
SPCS3-204ENST00000513139 GPR160Q9UJ42 338 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 FBXL3Q9UKT7 428 aa11.87□□□□□ -0.51
SPCS3-204ENST00000513139 PPIAL4EA0A075B759 164 aa11.86□□□□□ -0.51
SPCS3-204ENST00000513139 PPIAL4CA0A0B4J2A2 164 aa11.86□□□□□ -0.51
SPCS3-204ENST00000513139 LOC102725191A0A1B0GVB3 256 aa11.86□□□□□ -0.51
SPCS3-204ENST00000513139 A0A1W2PPW3 197 aa11.86□□□□□ -0.51
SPCS3-204ENST00000513139 CDHR4A6H8M9 788 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms