RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 RIDAP52758 137 aaKnown RBP10.02□□□□□ -0.8
CPNE4-209ENST00000512055 CLRN1P58418 232 aa10.02□□□□□ -0.8
CPNE4-209ENST00000512055 EIF4EBP2Q13542 120 aaPredicted RBP10.02□□□□□ -0.8
CPNE4-209ENST00000512055 FOXB2Q5VYV0 432 aa10.02□□□□□ -0.8
CPNE4-209ENST00000512055 FRMPD2BQ6IN97 320 aa10.02□□□□□ -0.8
CPNE4-209ENST00000512055 ADAMTSL4Q6UY14 1074 aa10.02□□□□□ -0.8
CPNE4-209ENST00000512055 SLC16A13Q7RTY0 426 aa10.02□□□□□ -0.8
CPNE4-209ENST00000512055 OR4K17Q8NGC6 315 aa10.02□□□□□ -0.8
CPNE4-209ENST00000512055 SYNPRQ8TBG9 265 aa10.02□□□□□ -0.8
CPNE4-209ENST00000512055 CDS1Q92903 461 aa10.02□□□□□ -0.8
CPNE4-209ENST00000512055 MSI2Q96DH6 328 aaKnown RBP10.02□□□□□ -0.8
CPNE4-209ENST00000512055 TOE1Q96GM8 510 aaKnown RBP10.02□□□□□ -0.8
CPNE4-209ENST00000512055 HHIPQ96QV1 700 aa10.02□□□□□ -0.8
CPNE4-209ENST00000512055 MS4A8Q9BY19 250 aa10.02□□□□□ -0.8
CPNE4-209ENST00000512055 HDAC8Q9BY41 377 aa10.02□□□□□ -0.8
CPNE4-209ENST00000512055 G3V3Q6 166 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 AIFM1O95831 613 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 RABIFP47224 123 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 THEM4Q5T1C6 240 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 IL34Q6ZMJ4 242 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 VRK2Q86Y07 508 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 KLHDC8BQ8IXV7 354 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 OR13C5Q8NGS8 318 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 RHOXF1Q8NHV9 184 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 THAP3Q8WTV1 239 aaPredicted RBP10.02□□□□□ -0.81
CPNE4-209ENST00000512055 SLC35B4Q969S0 331 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 PTGES2Q9H7Z7 377 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 FBXL4Q9UKA2 621 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 TRBV4-1A0A0J9YWV2 114 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 B4E171 279 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 PLPP1O14494 284 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 CTDSP2O14595 271 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 ACKR3P25106 362 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 ARRB1P49407 418 aaPredicted RBP10.02□□□□□ -0.81
CPNE4-209ENST00000512055 ZNF90Q03938 601 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 FABP9Q0Z7S8 132 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 SHHQ15465 462 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 ZNF684Q5T5D7 378 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 LILRA6Q6PI73 481 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 CLRN3Q8NCR9 226 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 RPL3LQ92901 407 aaKnown RBP10.02□□□□□ -0.81
CPNE4-209ENST00000512055 ASIC5Q9NY37 505 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 SCML1Q9UN30 329 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 A0A0A6YYC8 382 aaPredicted RBP10.02□□□□□ -0.81
CPNE4-209ENST00000512055 ASPDHA6ND91 283 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 I3L1I5 382 aaPredicted RBP10.02□□□□□ -0.81
CPNE4-209ENST00000512055 SULT1A2P50226 295 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 SPCS2Q15005 226 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 PHF19Q5T6S3 580 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 PLCXD3Q63HM9 321 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 FCRLBQ6BAA4 426 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 PODNL1Q6PEZ8 512 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 B3GLCTQ6Y288 498 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 TMUB2Q71RG4 321 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 OR4K15Q8NH41 348 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 OR5B3Q8NH48 314 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 MS4A4EQ96PG1 132 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 CNN2Q99439 309 aaKnown RBP10.02□□□□□ -0.81
CPNE4-209ENST00000512055 BET1LQ9NYM9 111 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 KLHL13Q9P2N7 655 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 CD207Q9UJ71 328 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 SLC7A7Q9UM01 511 aa10.02□□□□□ -0.81
CPNE4-209ENST00000512055 UMAD1C9J7I0 102 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 GP1BBP13224 206 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 B2MP61769 119 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 TIAL1Q01085 375 aaKnown RBP eCLIP10.01□□□□□ -0.81
CPNE4-209ENST00000512055 EXOSC7Q15024 291 aaKnown RBP10.01□□□□□ -0.81
CPNE4-209ENST00000512055 TMEM52BQ4KMG9 183 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 SHEQ5VZ18 495 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 TMEM268Q5VZI3 342 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 SUMF1Q8NBK3 374 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 TM4SF18Q96CE8 201 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 SAMD8Q96LT4 415 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 SERINC2Q96SA4 455 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 DPH1Q9BZG8 443 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 SPATA6Q9NWH7 488 aaPredicted RBP10.01□□□□□ -0.81
CPNE4-209ENST00000512055 OR1A1Q9P1Q5 309 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 OR5V1Q9UGF6 321 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 SLC23A2Q9UGH3 650 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 SERTAD3Q9UJW9 196 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 CSNK1G3Q9Y6M4 447 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 HELTA6NFD8 242 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 FBLL1A6NHQ2 334 aaKnown RBP10.01□□□□□ -0.81
CPNE4-209ENST00000512055 GASTP01350 101 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 CD80P33681 288 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 PLP2Q04941 152 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 IQCJQ1A5X6 159 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 KCNRGQ8N5I3 272 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 SLC25A18Q9H1K4 315 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 GALNT9Q9HCQ5 603 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 CHRNA9Q9UGM1 479 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 IL17BQ9UHF5 180 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 DCTN6O00399 190 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 OLFM2O95897 454 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 KIR2DS3Q14952 304 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 TMEM215Q68D42 235 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 BTNL8Q6UX41 500 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 LRRC28Q86X40 367 aaPredicted RBP10.01□□□□□ -0.81
CPNE4-209ENST00000512055 OR51L1Q8NGJ5 315 aa10.01□□□□□ -0.81
CPNE4-209ENST00000512055 TMEM239Q8WW34 195 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms