RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 MRPS28Q9Y2Q9 187 aaKnown RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 CORINQ9Y5Q5 1042 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 HSPE1-MOB4S4R3N1 261 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 SBF2Q86WG5 1849 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 MYO10Q9HD67 2058 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 SERINC4A6NH21 518 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 ACOT8O14734 319 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 C1orf105O95561 183 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 FGF3P11487 239 aaPredicted RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 TM4SF4P48230 202 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 GPR19Q15760 415 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 SLC35D2Q76EJ3 337 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 SYT9Q86SS6 491 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 THNSL2Q86YJ6 484 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 BPIFB2Q8N4F0 458 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 ARFGAP1Q8N6T3 406 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 GJC3Q8NFK1 279 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 OR2T35Q8NGX2 323 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 MFFQ9GZY8 342 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 NARFLQ9H6Q4 476 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 PATZ1Q9HBE1 687 aaKnown RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 PRSS16Q9NQE7 514 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 TNFRSF19Q9NS68 423 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 PAQR5Q9NXK6 330 aaPredicted RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 SERTM2A0A1B0GWG4 89 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 MEIOCA2RUB1 952 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 LRP5LA4QPB2 252 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 FAM90A27PA6NNH2 459 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 HS3ST1O14792 307 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 ARPC1BO15143 372 aaKnown RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 S100A4P26447 101 aaKnown RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 ETV4P43268 484 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 FABP6P51161 128 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 ERVFC1P60507 584 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 TNFRSF17Q02223 184 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 LTBQ06643 244 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 SHHQ15465 462 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 MRPL2Q5T653 305 aaKnown RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 CCDC28AQ8IWP9 274 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 KDF1Q8NAX2 398 aaPredicted RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 OR13H1Q8NG92 308 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 PINX1Q96BK5 328 aaKnown RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 TRMT61AQ96FX7 289 aaKnown RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 CNTNAP3Q9BZ76 1288 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 OR11A1Q9GZK7 315 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 GSTO2Q9H4Y5 243 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 C1orf123Q9NWV4 160 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 HS3ST3A1Q9Y663 406 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 SCN9AQ15858 1988 aa5.34□□□□□ -1.56
USP38-203ENST00000511739 A0A1W2PQL4 384 aaPredicted RBP5.34□□□□□ -1.56
USP38-203ENST00000511739 SLC22A23A1A5C7 686 aa5.34□□□□□ -1.56
USP38-203ENST00000511739 OR5G3P0C626 314 aa5.34□□□□□ -1.56
USP38-203ENST00000511739 GLRA1P23415 457 aa5.34□□□□□ -1.56
USP38-203ENST00000511739 CD1CP29017 333 aa5.34□□□□□ -1.56
USP38-203ENST00000511739 PCGF2P35227 344 aa5.34□□□□□ -1.56
USP38-203ENST00000511739 HTR6P50406 440 aa5.34□□□□□ -1.56
USP38-203ENST00000511739 UBE2IP63279 158 aaKnown RBP5.34□□□□□ -1.56
USP38-203ENST00000511739 FAM69AQ5T7M9 428 aa5.34□□□□□ -1.56
USP38-203ENST00000511739 BTNL3Q6UXE8 466 aa5.34□□□□□ -1.56
USP38-203ENST00000511739 Q6ZTK2 550 aa5.34□□□□□ -1.56
USP38-203ENST00000511739 TAS1R1Q7RTX1 841 aa5.34□□□□□ -1.56
USP38-203ENST00000511739 TSPYL5Q86VY4 417 aaPredicted RBP5.34□□□□□ -1.56
USP38-203ENST00000511739 MAML2Q8IZL2 1156 aaPredicted RBP5.34□□□□□ -1.56
USP38-203ENST00000511739 TMEM130Q8N3G9 435 aa5.34□□□□□ -1.56
USP38-203ENST00000511739 FRMD1Q8N878 549 aa5.34□□□□□ -1.56
USP38-203ENST00000511739 ZNF321PQ8N8H1 164 aa5.34□□□□□ -1.56
USP38-203ENST00000511739 OR5K2Q8NHB8 316 aa5.34□□□□□ -1.56
USP38-203ENST00000511739 M1APQ8TC57 530 aa5.34□□□□□ -1.56
USP38-203ENST00000511739 BRIX1Q8TDN6 353 aaKnown RBP5.34□□□□□ -1.56
USP38-203ENST00000511739 TMIGD2Q96BF3 282 aa5.34□□□□□ -1.56
USP38-203ENST00000511739 MRPS24Q96EL2 167 aaKnown RBP5.34□□□□□ -1.56
USP38-203ENST00000511739 ELMOD3Q96FG2 381 aa5.34□□□□□ -1.56
USP38-203ENST00000511739 CHST11Q9NPF2 352 aa5.34□□□□□ -1.56
USP38-203ENST00000511739 P4HTMQ9NXG6 502 aa5.34□□□□□ -1.56
USP38-203ENST00000511739 POLDIP2Q9Y2S7 368 aa5.34□□□□□ -1.56
USP38-203ENST00000511739 H3BMQ9 156 aa5.33□□□□□ -1.56
USP38-203ENST00000511739 HSD17B6O14756 317 aa5.33□□□□□ -1.56
USP38-203ENST00000511739 SNNO75324 88 aaPredicted RBP5.33□□□□□ -1.56
USP38-203ENST00000511739 SORBS2O94875 1100 aaKnown RBP5.33□□□□□ -1.56
USP38-203ENST00000511739 HBE1P02100 147 aa5.33□□□□□ -1.56
USP38-203ENST00000511739 AADACP22760 399 aa5.33□□□□□ -1.56
USP38-203ENST00000511739 PRLHRP49683 370 aa5.33□□□□□ -1.56
USP38-203ENST00000511739 ERHP84090 104 aaKnown RBP5.33□□□□□ -1.56
USP38-203ENST00000511739 C4orf17Q53FE4 359 aa5.33□□□□□ -1.56
USP38-203ENST00000511739 MED25Q71SY5 747 aa5.33□□□□□ -1.56
USP38-203ENST00000511739 MEPCEQ7L2J0 689 aaKnown RBP5.33□□□□□ -1.56
USP38-203ENST00000511739 TSEN54Q7Z6J9 526 aaKnown RBP5.33□□□□□ -1.56
USP38-203ENST00000511739 LRRTM3Q86VH5 581 aa5.33□□□□□ -1.56
USP38-203ENST00000511739 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.33□□□□□ -1.56
USP38-203ENST00000511739 KCNG3Q8TAE7 436 aa5.33□□□□□ -1.56
USP38-203ENST00000511739 SLC25A43Q8WUT9 341 aaPredicted RBP5.33□□□□□ -1.56
USP38-203ENST00000511739 TMEM40Q8WWA1 233 aa5.33□□□□□ -1.56
USP38-203ENST00000511739 MUL1Q969V5 352 aa5.33□□□□□ -1.56
USP38-203ENST00000511739 MOB3AQ96BX8 217 aa5.33□□□□□ -1.56
USP38-203ENST00000511739 AMBRA1Q9C0C7 1298 aa5.33□□□□□ -1.56
USP38-203ENST00000511739 TXNL4BQ9NX01 149 aaKnown RBP5.33□□□□□ -1.56
USP38-203ENST00000511739 MTCH1Q9NZJ7 389 aa5.33□□□□□ -1.56
USP38-203ENST00000511739 RASD1Q9Y272 281 aa5.33□□□□□ -1.56
USP38-203ENST00000511739 XKRY2A2RUG3 117 aa5.33□□□□□ -1.56
USP38-203ENST00000511739 TSTD3H0UI37 97 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms