RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 FHL1Q13642 323 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 DGCR6Q14129 220 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 ALG10Q5BKT4 473 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 LRFN4Q6PJG9 635 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 B3GLCTQ6Y288 498 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 OAFQ86UD1 273 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 CDK20Q8IZL9 346 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 RNF113BQ8IZP6 322 aaKnown RBP12.19□□□□□ -0.46
DDX41-212ENST00000511040 MAGEE2Q8TD90 523 aaPredicted RBP12.19□□□□□ -0.46
DDX41-212ENST00000511040 HTRA1Q92743 480 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 PIGTQ969N2 578 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 FBXW5Q969U6 566 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 CCDC124Q96CT7 223 aaKnown RBP12.19□□□□□ -0.46
DDX41-212ENST00000511040 PERPQ96FX8 193 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 BOD1Q96IK1 185 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 RADILQ96JH8 1075 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 ALPK1Q96QP1 1244 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 ZNF347Q96SE7 839 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 SEPHS2Q99611 448 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 THTPAQ9BU02 230 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 CXXC4Q9H2H0 198 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 ANKRD19PQ9H560 264 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 SEC61A2Q9H9S3 476 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 OBP2BQ9NPH6 170 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 CISD1Q9NZ45 108 aaKnown RBP12.19□□□□□ -0.46
DDX41-212ENST00000511040 ACTR3BQ9P1U1 418 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 LAMP3Q9UQV4 416 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 HIF3AQ9Y2N7 669 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 MAGED1Q9Y5V3 778 aaPredicted RBP12.19□□□□□ -0.46
DDX41-212ENST00000511040 ATP23Q9Y6H3 246 aa12.19□□□□□ -0.46
DDX41-212ENST00000511040 HTR3EA5X5Y0 456 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 E7EQL1 145 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 ATP6V1G2-DDX39BF2Z307 99 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 TRMUO75648 421 aaKnown RBP12.18□□□□□ -0.46
DDX41-212ENST00000511040 FABP3P05413 133 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 QDPRP09417 244 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 CD79AP11912 226 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 ACADSP16219 412 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 IDH3GP51553 393 aaPredicted RBP12.18□□□□□ -0.46
DDX41-212ENST00000511040 CTXN1P60606 82 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 RPS4XP62701 263 aaKnown RBP12.18□□□□□ -0.46
DDX41-212ENST00000511040 PIGFQ07326 219 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 NPRL3Q12980 569 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 ARMC4Q5T2S8 1044 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 MDP1Q86V88 176 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 DHFR2Q86XF0 187 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 ZDHHC21Q8IVQ6 265 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 ARHGAP24Q8N264 748 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 LRRC75AQ8NAA5 344 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 NOXO1Q8NFA2 376 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 OR4K5Q8NGD3 323 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 SMAP2Q8WU79 429 aaPredicted RBP12.18□□□□□ -0.46
DDX41-212ENST00000511040 HDAC2Q92769 488 aaKnown RBP12.18□□□□□ -0.46
DDX41-212ENST00000511040 DHRS1Q96LJ7 313 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 SLC38A2Q96QD8 506 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 FOXB1Q99853 325 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 NOX3Q9HBY0 568 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 PRPF19Q9UMS4 504 aaKnown RBP12.18□□□□□ -0.46
DDX41-212ENST00000511040 MOKQ9UQ07 419 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 MGAT4BQ9UQ53 548 aa12.18□□□□□ -0.46
DDX41-212ENST00000511040 HEATR1Q9H583 2144 aaKnown RBP12.17□□□□□ -0.46
DDX41-212ENST00000511040 TCRBV5S2A0A599 114 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 GADD45GO95257 159 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 CECR9P0C854 216 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 PATE4P0C8F1 98 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 ZNF26P17031 533 aaPredicted RBP12.17□□□□□ -0.46
DDX41-212ENST00000511040 RRM2P31350 389 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 RPL4P36578 427 aaKnown RBP12.17□□□□□ -0.46
DDX41-212ENST00000511040 OMPP47874 163 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 ERVK-25P63136 954 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 CBX1P83916 185 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 TRIM25Q14258 630 aaKnown RBP12.17□□□□□ -0.46
DDX41-212ENST00000511040 PGGHGQ32M88 737 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 SPNS3Q6ZMD2 512 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 TMPRSS11FQ6ZWK6 438 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 MYPOPQ86VE0 399 aaPredicted RBP12.17□□□□□ -0.46
DDX41-212ENST00000511040 DEPDC4Q8N2C3 294 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 CLDN22Q8N7P3 220 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 TMEM171Q8WVE6 324 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 IGFBPL1Q8WX77 278 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 NSMAFQ92636 917 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 MCHR2Q969V1 340 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 GTPBP3Q969Y2 492 aaKnown RBP12.17□□□□□ -0.46
DDX41-212ENST00000511040 TSPAN32Q96QS1 320 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 FUZQ9BT04 418 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 MRPL13Q9BYD1 178 aaKnown RBP12.17□□□□□ -0.46
DDX41-212ENST00000511040 TXNIPQ9H3M7 391 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 IL1RAPQ9NPH3 570 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 ZNF346Q9UL40 294 aaKnown RBP12.17□□□□□ -0.46
DDX41-212ENST00000511040 TMEM5Q9Y2B1 443 aa12.17□□□□□ -0.46
DDX41-212ENST00000511040 SH3PXD2BA1X283 911 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 GYG2O15488 501 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 DHHO43323 396 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 SLC2A10O95528 541 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 DANCRP0C864 163 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 HOXB1P14653 301 aaPredicted RBP12.16□□□□□ -0.46
DDX41-212ENST00000511040 CBR1P16152 277 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 ACVR1BP36896 505 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 LIMS1P48059 325 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 SLC9A3P48764 834 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms