RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 SYNGR3O43761 229 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 UBL3O95164 117 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 VIMP08670 466 aaKnown RBP13.27□□□□□ -0.29
TPM3-219ENST00000509409 PATE4P0C8F1 98 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 LYNX1P0DP58 116 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 ZNF14P17017 642 aaPredicted RBP13.27□□□□□ -0.29
TPM3-219ENST00000509409 TCN1P20061 433 aaPredicted RBP13.27□□□□□ -0.29
TPM3-219ENST00000509409 GIFP27352 417 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 APEX1P27695 318 aaKnown RBP13.27□□□□□ -0.29
TPM3-219ENST00000509409 RAB39AQ14964 217 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 NPTX1Q15818 432 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 INTS11Q5TA45 600 aaKnown RBP13.27□□□□□ -0.29
TPM3-219ENST00000509409 LINC00114Q6XXX2 140 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 ZNF627Q7L945 461 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 PIWIL3Q7Z3Z3 882 aaKnown RBP13.27□□□□□ -0.29
TPM3-219ENST00000509409 RETREG3Q86VR2 466 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 DPP10Q8N608 796 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 OR10A6Q8NH74 314 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 OR6X1Q8NH79 312 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 ADAMTS16Q8TE57 1224 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 ZNF566Q969W8 418 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 MRPL24Q96A35 216 aaKnown RBP13.27□□□□□ -0.29
TPM3-219ENST00000509409 MAGEB18Q96M61 343 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 SNX18Q96RF0 628 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 SYT3Q9BQG1 590 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 RNF121Q9H920 327 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 NPHS2Q9NP85 383 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 SLC7A7Q9UM01 511 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 FZR1Q9UM11 496 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 MXRA5Q9NR99 2828 aa13.27□□□□□ -0.29
TPM3-219ENST00000509409 TRAPPC13A5PLN9 417 aa13.26□□□□□ -0.29
TPM3-219ENST00000509409 HMGB1P1B2RPK0 211 aaPredicted RBP13.26□□□□□ -0.29
TPM3-219ENST00000509409 ENTPD5O75356 428 aa13.26□□□□□ -0.29
TPM3-219ENST00000509409 ZNF35P13682 527 aa13.26□□□□□ -0.29
TPM3-219ENST00000509409 CD247P20963 164 aa13.26□□□□□ -0.29
TPM3-219ENST00000509409 GLRXP35754 106 aa13.26□□□□□ -0.29
TPM3-219ENST00000509409 ALDH3B1P43353 468 aa13.26□□□□□ -0.29
TPM3-219ENST00000509409 EVX1P49640 407 aa13.26□□□□□ -0.29
TPM3-219ENST00000509409 RPS23P62266 143 aaKnown RBP13.26□□□□□ -0.29
TPM3-219ENST00000509409 ZP4Q12836 540 aa13.26□□□□□ -0.29
TPM3-219ENST00000509409 MELKQ14680 651 aa13.26□□□□□ -0.29
TPM3-219ENST00000509409 ZNF74Q16587 644 aa13.26□□□□□ -0.29
TPM3-219ENST00000509409 CR1LQ2VPA4 569 aa13.26□□□□□ -0.29
TPM3-219ENST00000509409 WDR88Q6ZMY6 472 aa13.26□□□□□ -0.29
TPM3-219ENST00000509409 SKA3Q8IX90 412 aa13.26□□□□□ -0.29
TPM3-219ENST00000509409 OR4D11Q8NGI4 311 aa13.26□□□□□ -0.29
TPM3-219ENST00000509409 TMEM54Q969K7 222 aa13.26□□□□□ -0.29
TPM3-219ENST00000509409 SOX7Q9BT81 388 aa13.26□□□□□ -0.29
TPM3-219ENST00000509409 MS4A5Q9H3V2 200 aa13.26□□□□□ -0.29
TPM3-219ENST00000509409 KAT8Q9H7Z6 458 aaKnown RBP13.26□□□□□ -0.29
TPM3-219ENST00000509409 TAS2R5Q9NYW4 299 aa13.26□□□□□ -0.29
TPM3-219ENST00000509409 DUSP13Q9UII6 198 aa13.26□□□□□ -0.29
TPM3-219ENST00000509409 FBXL3Q9UKT7 428 aa13.26□□□□□ -0.29
TPM3-219ENST00000509409 A0A0G2JND7 137 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 BLOC1S5-TXNDC5H3BN57 136 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 M0R233 179 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 LILRA1O75019 489 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 FARS2O95363 451 aaKnown RBP13.25□□□□□ -0.29
TPM3-219ENST00000509409 BCL10O95999 233 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 THY1P04216 161 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 TACSTD2P09758 323 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 PCGF2P35227 344 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 THBS2P35442 1172 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 CYLC2Q14093 348 aaPredicted RBP13.25□□□□□ -0.29
TPM3-219ENST00000509409 MSMPQ1L6U9 139 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 LRP11Q86VZ4 500 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 SLC22A24Q8N4F4 322 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 LRRC17Q8N6Y2 441 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 LINC01356Q8N9X3 169 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 TSPEARQ8WU66 669 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 RASSF5Q8WWW0 418 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 HPS1Q92902 700 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 SLC25A44Q96H78 314 aaPredicted RBP13.25□□□□□ -0.29
TPM3-219ENST00000509409 MPP4Q96JB8 637 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 ZNF75AQ96N20 296 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 SH3GL3Q99963 347 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 ZNF224Q9NZL3 707 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 ZNF229Q9UJW7 825 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 SVEP1Q4LDE5 3571 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 STAB1Q9NY15 2570 aa13.25□□□□□ -0.29
TPM3-219ENST00000509409 FBN3Q75N90 2809 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 YLPM1P49750 1951 aaKnown RBP13.24□□□□□ -0.29
TPM3-219ENST00000509409 A0A1W2PPW3 197 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 DHHO43323 396 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 LYPD3O95274 346 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 SERPINA5P05154 406 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 IGFBP1P08833 259 aaPredicted RBP13.24□□□□□ -0.29
TPM3-219ENST00000509409 QDPRP09417 244 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 OR8G3PP0DMU2 310 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 IL2RGP31785 369 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 SRP14P37108 136 aaKnown RBP13.24□□□□□ -0.29
TPM3-219ENST00000509409 SEC24CP53992 1094 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 CLRN1P58418 232 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 SELENOVP59797 346 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 SRSF2Q01130 221 aaKnown RBP13.24□□□□□ -0.29
TPM3-219ENST00000509409 RIN1Q13671 783 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 CCNIQ14094 377 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 TRIP10Q15642 601 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 KRTAP24-1Q3LI83 254 aa13.24□□□□□ -0.29
TPM3-219ENST00000509409 TMEM53Q6P2H8 277 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms