RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 POLR3HQ9Y535 204 aaPredicted RBP3.73□□□□□ -1.81
CALCOCO2-213ENST00000509112 TIMM22Q9Y584 194 aa3.73□□□□□ -1.81
CALCOCO2-213ENST00000509112 DSPPQ9NZW4 1301 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 NUP214P35658 2090 aaPredicted RBP3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 KMT2CQ8NEZ4 4911 aaKnown RBP3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 A0A1W2PR80 420 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 C9JVG2 144 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 CLDN34H7C241 214 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 hCG_2039718K7EN88 272 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 STX11O75558 287 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 SKAP2O75563 359 aaPredicted RBP3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 LYPLA1O75608 230 aaPredicted RBP3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 UGT2B17O75795 530 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 AGR2O95994 175 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 BCL10O95999 233 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 IGHV3-9P01782 118 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 CECR9P0C854 216 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 CBR1P16152 277 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 SDC1P18827 310 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 KRT4P19013 534 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 ARR3P36575 388 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 PGM1P36871 562 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 LIPAP38571 399 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 GPR6P46095 362 aaPredicted RBP3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 CCT3P49368 545 aaKnown RBP3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 FOXA1P55317 472 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 DNAJB13P59910 316 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 LMO4P61968 165 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 UBA52P62987 128 aaKnown RBP3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 MYBPC1Q00872 1141 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 DEFA6Q01524 100 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 MERTKQ12866 999 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 FOXI1Q12951 378 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 UAP1Q16222 522 aaPredicted RBP3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 CARTPTQ16568 116 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 ARHGAP11BQ3KRB8 267 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 C4orf46Q504U0 113 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 ELFN2Q5R3F8 820 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 CCNJQ5T5M9 372 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 IGFL4Q6B9Z1 124 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 SHQ1Q6PI26 577 aaKnown RBP3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 CASP12Q6UXS9 341 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 EIF3MQ7L2H7 374 aaKnown RBP3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 ZNF627Q7L945 461 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 MAVSQ7Z434 540 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 SPATA19Q7Z5L4 167 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 LDLRAD3Q86YD5 345 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 ZDHHC22Q8N966 263 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 ZIC4Q8N9L1 334 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 BEND2Q8NDZ0 799 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 ATP6V1C2Q8NEY4 427 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 CLDND2Q8NHS1 167 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 CDC26Q8NHZ8 85 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 MIPOL1Q8TD10 442 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 RDH5Q92781 318 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 BCL2L2Q92843 193 aaPredicted RBP3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 CIDECQ96AQ7 238 aaPredicted RBP3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 DDIT4LQ96D03 193 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 COQ8BQ96D53 544 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 SNX18Q96RF0 628 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 KCNA7Q96RP8 456 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 THUMPD3Q9BV44 507 aaKnown RBP3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 ZNF416Q9BWM5 594 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 ZNF350Q9GZX5 532 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 SLC25A32Q9H2D1 315 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 CDC42EP4Q9H3Q1 356 aaKnown RBP3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 DENND2DQ9H6A0 471 aaPredicted RBP3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 MID1IP1Q9NPA3 183 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 CTPS2Q9NRF8 586 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 TBC1D23Q9NUY8 699 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 MED29Q9NX70 200 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 GAR1Q9NY12 217 aaKnown RBP3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 NINJ2Q9NZG7 142 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 TMEM216Q9P0N5 145 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 SH3BP4Q9P0V3 963 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 NKX1-2Q9UD57 310 aaPredicted RBP3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 STEAP1Q9UHE8 339 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 FAF1Q9UNN5 650 aaPredicted RBP3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 MMP24Q9Y5R2 645 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 RYR3Q15413 4870 aa3.72□□□□□ -1.81
CALCOCO2-213ENST00000509112 IGHV2OR16-5A0A0B4J2B6 119 aa3.71□□□□□ -1.82
CALCOCO2-213ENST00000509112 A0A0G2JMP0 313 aa3.71□□□□□ -1.82
CALCOCO2-213ENST00000509112 A0A0X1KG70 313 aa3.71□□□□□ -1.82
CALCOCO2-213ENST00000509112 A0A1B0GUS0 222 aa3.71□□□□□ -1.82
CALCOCO2-213ENST00000509112 TMEM114B3SHH9 223 aa3.71□□□□□ -1.82
CALCOCO2-213ENST00000509112 TRIM49D1C9J1S8 452 aa3.71□□□□□ -1.82
CALCOCO2-213ENST00000509112 ZNF587BE7ETH6 402 aa3.71□□□□□ -1.82
CALCOCO2-213ENST00000509112 LSM1O15116 133 aaKnown RBP3.71□□□□□ -1.82
CALCOCO2-213ENST00000509112 SCAMP2O15127 329 aaKnown RBP3.71□□□□□ -1.82
CALCOCO2-213ENST00000509112 SYNGR3O43761 229 aa3.71□□□□□ -1.82
CALCOCO2-213ENST00000509112 SEC22BO75396 215 aa3.71□□□□□ -1.82
CALCOCO2-213ENST00000509112 RP2O75695 350 aa3.71□□□□□ -1.82
CALCOCO2-213ENST00000509112 SLU7O95391 586 aaKnown RBP3.71□□□□□ -1.82
CALCOCO2-213ENST00000509112 CSTAP01040 98 aa3.71□□□□□ -1.82
CALCOCO2-213ENST00000509112 GPIP06744 558 aa3.71□□□□□ -1.82
CALCOCO2-213ENST00000509112 FGF4P08620 206 aa3.71□□□□□ -1.82
CALCOCO2-213ENST00000509112 ABHD2P08910 425 aa3.71□□□□□ -1.82
CALCOCO2-213ENST00000509112 SAGP10523 405 aaPredicted RBP3.71□□□□□ -1.82
CALCOCO2-213ENST00000509112 PRTN3P24158 256 aa3.71□□□□□ -1.82
CALCOCO2-213ENST00000509112 GCH1P30793 250 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms