RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 LRFN4Q6PJG9 635 aa9.28□□□□□ -0.92
POLR2J3-213ENST00000508848 LINGO2Q7L985 606 aa9.28□□□□□ -0.92
POLR2J3-213ENST00000508848 ZNF611Q8N823 705 aa9.28□□□□□ -0.92
POLR2J3-213ENST00000508848 IGFBPL1Q8WX77 278 aa9.28□□□□□ -0.92
POLR2J3-213ENST00000508848 ASB10Q8WXI3 467 aa9.28□□□□□ -0.92
POLR2J3-213ENST00000508848 PIGTQ969N2 578 aa9.28□□□□□ -0.92
POLR2J3-213ENST00000508848 NMD3Q96D46 503 aaKnown RBP9.28□□□□□ -0.92
POLR2J3-213ENST00000508848 PLPPR2Q96GM1 343 aa9.28□□□□□ -0.92
POLR2J3-213ENST00000508848 LRGUKQ96M69 825 aa9.28□□□□□ -0.92
POLR2J3-213ENST00000508848 TNFRSF13CQ96RJ3 184 aa9.28□□□□□ -0.92
POLR2J3-213ENST00000508848 ALG12Q9BV10 488 aa9.28□□□□□ -0.92
POLR2J3-213ENST00000508848 CXXC4Q9H2H0 198 aa9.28□□□□□ -0.92
POLR2J3-213ENST00000508848 MED29Q9NX70 200 aa9.28□□□□□ -0.92
POLR2J3-213ENST00000508848 FBXL3Q9UKT7 428 aa9.28□□□□□ -0.92
POLR2J3-213ENST00000508848 SIGLEC7Q9Y286 467 aa9.28□□□□□ -0.92
POLR2J3-213ENST00000508848 PRRC2AP48634 2157 aaKnown RBP9.28□□□□□ -0.92
POLR2J3-213ENST00000508848 HIVEP1P15822 2718 aa9.27□□□□□ -0.92
POLR2J3-213ENST00000508848 TRBV4-1A0A0J9YWV2 114 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 A0A1W2PPR1 153 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 TCRBV3S1A0A5B6 114 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 C11orf98E9PRG8 122 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 KPNA4O00629 521 aaPredicted RBP9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 IMPA2O14732 288 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 ARPC3O15145 178 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 CLOCKO15516 846 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 RAD51DO75771 328 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 TXNDC12O95881 172 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 RAF1P04049 648 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 CD3EP07766 207 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 CD14P08571 375 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 SAGP10523 405 aaPredicted RBP9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 CBR1P16152 277 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 ATP6V1B2P21281 511 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 FUT4P22083 530 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 FPR3P25089 353 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 HOXC12P31275 282 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 ARR3P36575 388 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 AQP2P41181 271 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 GSSP48637 474 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 CSNK1A1P48729 337 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 ARF1P84077 181 aaKnown RBP9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 TSC22D1Q15714 1073 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 ACKR1Q16570 336 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 CEACAM16Q2WEN9 425 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 FBXW10Q5XX13 1052 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 TBPL2Q6SJ96 375 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 KLHL24Q6TFL4 600 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 PAMR1Q6UXH9 720 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 CD300LDQ6UXZ3 194 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 SPNS3Q6ZMD2 512 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 CDH24Q86UP0 819 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 WFDC8Q8IUA0 241 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 ARIH2OSQ8N7S6 290 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 OR4K5Q8NGD3 323 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 OR6N1Q8NGY5 312 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 PIK3IP1Q96FE7 263 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 ALPK1Q96QP1 1244 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 SNX18Q96RF0 628 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 KCNK17Q96T54 332 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 FOXC2Q99958 501 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 EMC6Q9BV81 110 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 NELFAQ9H3P2 528 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 YY1AP1Q9H869 796 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 NRIP3Q9NQ35 241 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 B3GNT2Q9NY97 397 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 RHCGQ9UBD6 479 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 TMCC3Q9ULS5 477 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 POMPQ9Y244 141 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 RNF115Q9Y4L5 304 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 LYVE1Q9Y5Y7 322 aa9.27□□□□□ -0.93
POLR2J3-213ENST00000508848 ARRDC5A6NEK1 342 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 hCG_2039718K7EN88 272 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 CDC42EP2O14613 210 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 HS3ST1O14792 307 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 DHHO43323 396 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 TRMUO75648 421 aaKnown RBP9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 NDUFB2O95178 105 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 OR8G3PP0DMU2 310 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 NPR2P20594 1047 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 DNASE1P24855 282 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 CD40P25942 277 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 RRM2P31350 389 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 UBE2NP61088 152 aaKnown RBP9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 MRPS34P82930 218 aaKnown RBP9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 LSM11P83369 360 aaKnown RBP eCLIP9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 IL1RL1Q01638 556 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 COX10Q12887 443 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 TSPAN31Q12999 210 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 CAMK2DQ13557 499 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 SEC23BQ15437 767 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 TESK1Q15569 626 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 OR2T5Q6IEZ7 315 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 ZNF770Q6IQ21 691 aaPredicted RBP9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 RPL13AP3Q6NVV1 102 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 CYP2R1Q6VVX0 501 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 DPY19L2P2Q6ZN68 376 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 ZNF704Q6ZNC4 412 aaPredicted RBP9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 FAM122BQ7Z309 247 aa9.26□□□□□ -0.93
POLR2J3-213ENST00000508848 ZER1Q7Z7L7 766 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms