RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 ZNF740Q8NDX6 193 aa2.94□□□□□ -1.94
TOPBP1-206ENST00000508524 DNAJA4Q8WW22 397 aaPredicted RBP2.94□□□□□ -1.94
TOPBP1-206ENST00000508524 CCNL2Q96S94 520 aaPredicted RBP2.94□□□□□ -1.94
TOPBP1-206ENST00000508524 SLC17A9Q9BYT1 436 aa2.94□□□□□ -1.94
TOPBP1-206ENST00000508524 NMNAT2Q9BZQ4 307 aa2.94□□□□□ -1.94
TOPBP1-206ENST00000508524 GCNT4Q9P109 453 aa2.94□□□□□ -1.94
TOPBP1-206ENST00000508524 CRLS1Q9UJA2 301 aa2.94□□□□□ -1.94
TOPBP1-206ENST00000508524 U3KQA8 63 aa2.94□□□□□ -1.94
TOPBP1-206ENST00000508524 DOCK9Q9BZ29 2069 aa2.94□□□□□ -1.94
TOPBP1-206ENST00000508524 UBE4BO95155 1302 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 MN1Q10571 1320 aaPredicted RBP2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 SCN2AQ99250 2005 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 POLEQ07864 2286 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 PLXNA2O75051 1894 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 WASHC1A8K0Z3 465 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 DLGAP1O14490 977 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 HCN1O60741 890 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 HMMRO75330 724 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 ANXA4P09525 319 aaPredicted RBP2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 AHCYP23526 432 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 ARL2P36404 184 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 PMELP40967 661 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 QARSP47897 775 aaKnown RBP2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 IFNAR2P48551 515 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 NAPAP54920 295 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 PTGES3Q15185 160 aaKnown RBP2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 DNAJC21Q5F1R6 531 aaKnown RBP2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 XKR4Q5GH76 650 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 ETFRF1Q6IPR1 90 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 ALKAL1Q6UXT8 129 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 WDR88Q6ZMY6 472 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 TMEM26Q6ZUK4 368 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 LRRC70Q7Z2Q7 622 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 MIER3Q7Z3K6 550 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 ANKRD20A12PQ8NF67 263 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 NCLNQ969V3 563 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 GABRG3Q99928 467 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 MAGT1Q9H0U3 335 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 CNOT2Q9NZN8 540 aaKnown RBP2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 CYTH4Q9UIA0 394 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 XPO7Q9UIA9 1087 aaKnown RBP2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 ASB3Q9Y575 518 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 DIDO1Q9BTC0 2240 aaKnown RBP2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 ANAPC1Q9H1A4 1944 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 TTC41PQ6P2S7 1318 aa2.93□□□□□ -1.94
TOPBP1-206ENST00000508524 ZNF638Q14966 1978 aaKnown RBP2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 FAM170AA1A519 330 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 SMCO2A6NFE2 343 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 LRRC30A6NM36 301 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 TRAPPC3O43617 180 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 STX11O75558 287 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 TDP2O95551 362 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 IGLV3-19P01714 112 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 APODP05090 189 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 GIMD1P0DJR0 217 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 RALAP11233 206 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 ANXA3P12429 323 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 MX1P20591 662 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 ATP5A1P25705 553 aaKnown RBP2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 DUSP3P51452 185 aaPredicted RBP2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 OSTNP61366 133 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 SPAG1Q07617 926 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 NSDHLQ15738 373 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 PAGE3Q5JUK9 113 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 CEP170P1Q96L14 293 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 RIT2Q99578 217 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 CITED1Q99966 193 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 KRT23Q9C075 422 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 POLD4Q9HCU8 107 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 RP1P56715 2156 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 HRNRQ86YZ3 2850 aaPredicted RBP2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 PHLPP2Q6ZVD8 1323 aa2.92□□□□□ -1.94
TOPBP1-206ENST00000508524 MGAM2Q2M2H8 2515 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 AKAP6Q13023 2319 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 NKX2-6A6NCS4 301 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 SLC9B1P1A6NJY1 282 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 GJE1A6NN92 205 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 C10orf142B7Z368 130 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 HCRTO43612 131 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 SLC37A4O43826 429 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 TNFSF15O95150 251 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 MAGP20916 626 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 SFNP31947 248 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 DLSTP36957 453 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 SUCLG1P53597 346 aaKnown RBP2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 PSMC5P62195 406 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 BDH1Q02338 343 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 ILKQ13418 452 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 EXOSC2Q13868 293 aaKnown RBP2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 PDIA5Q14554 519 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 SCYL2Q6P3W7 929 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 SPNS3Q6ZMD2 512 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 TMEM25Q86YD3 366 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 SLC25A45Q8N413 288 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 SPC24Q8NBT2 197 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 M1APQ8TC57 530 aa2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 MRPS31Q92665 395 aaKnown RBP2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 RPUSD4Q96CM3 377 aaKnown RBP2.91□□□□□ -1.94
TOPBP1-206ENST00000508524 MTMR9Q96QG7 549 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms