RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 FKBP7Q9Y680 259 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 MALRD1Q5VYJ5 2156 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 hCG_2039718K7EN88 272 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 PATE4P0C8F1 98 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 ZNF14P17017 642 aaPredicted RBP12.35□□□□□ -0.43
RAB28-205ENST00000508274 PTDSS1P48651 473 aaKnown RBP12.35□□□□□ -0.43
RAB28-205ENST00000508274 TAS2R41P59536 307 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 PIN1Q13526 163 aaPredicted RBP12.35□□□□□ -0.43
RAB28-205ENST00000508274 MAPRE2Q15555 327 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 CARTPTQ16568 116 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 MSMPQ1L6U9 139 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 C6orf52Q5T4I8 152 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 SPATA21Q7Z572 469 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 NANOGNBQ7Z5D8 188 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 CCDC36Q8IYA8 594 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 OR6X1Q8NH79 312 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 TMEM54Q969K7 222 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 RCN3Q96D15 328 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 SLC19A3Q9BZV2 496 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 C20orf141Q9NUB4 165 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 GLTPQ9NZD2 209 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 ZNF229Q9UJW7 825 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 CAPN7Q9Y6W3 813 aa12.35□□□□□ -0.43
RAB28-205ENST00000508274 TMEM129A0AVI4 362 aa12.34□□□□□ -0.43
RAB28-205ENST00000508274 SH3PXD2BA1X283 911 aa12.34□□□□□ -0.43
RAB28-205ENST00000508274 FAM220BPB1ANY3 271 aa12.34□□□□□ -0.43
RAB28-205ENST00000508274 BLOC1S5-TXNDC5H3BN57 136 aa12.34□□□□□ -0.43
RAB28-205ENST00000508274 NPPAP01160 153 aa12.34□□□□□ -0.43
RAB28-205ENST00000508274 F13BP05160 661 aa12.34□□□□□ -0.43
RAB28-205ENST00000508274 IGFBP1P08833 259 aaPredicted RBP12.34□□□□□ -0.43
RAB28-205ENST00000508274 CSF3P09919 207 aa12.34□□□□□ -0.43
RAB28-205ENST00000508274 PGA4P0DJD7 388 aa12.34□□□□□ -0.43
RAB28-205ENST00000508274 PGA3P0DJD8 388 aa12.34□□□□□ -0.43
RAB28-205ENST00000508274 GIPRP48546 466 aa12.34□□□□□ -0.43
RAB28-205ENST00000508274 VLDLRP98155 873 aa12.34□□□□□ -0.43
RAB28-205ENST00000508274 RUNX1T1Q06455 604 aa12.34□□□□□ -0.43
RAB28-205ENST00000508274 RPL18Q07020 188 aaKnown RBP12.34□□□□□ -0.43
RAB28-205ENST00000508274 ERICH5Q6P6B1 374 aa12.34□□□□□ -0.43
RAB28-205ENST00000508274 CDK20Q8IZL9 346 aa12.34□□□□□ -0.43
RAB28-205ENST00000508274 ZNF566Q969W8 418 aa12.34□□□□□ -0.43
RAB28-205ENST00000508274 SLC25A44Q96H78 314 aaPredicted RBP12.34□□□□□ -0.43
RAB28-205ENST00000508274 MRGBPQ9NV56 204 aa12.34□□□□□ -0.43
RAB28-205ENST00000508274 BAG5Q9UL15 447 aa12.34□□□□□ -0.43
RAB28-205ENST00000508274 ATRQ13535 2644 aa12.33□□□□□ -0.43
RAB28-205ENST00000508274 A8MV72 311 aaPredicted RBP12.33□□□□□ -0.44
RAB28-205ENST00000508274 VWC2LB2RUY7 222 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 MT-ND1P03886 318 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 HIST1H2ABP04908 130 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 FUT1P19526 365 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 NPR2P20594 1047 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 FUT4P22083 530 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 USF1P22415 310 aaPredicted RBP12.33□□□□□ -0.44
RAB28-205ENST00000508274 PPOXP50336 477 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 PDLIM4P50479 330 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 RAB1AP62820 205 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 DAG1Q14118 895 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 GGTLC2Q14390 218 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 RAB39AQ14964 217 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 CYBRD1Q53TN4 286 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 LRFN4Q6PJG9 635 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 HIST3H2AQ7L7L0 130 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 SKA3Q8IX90 412 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 PCYOX1LQ8NBM8 494 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 OR2T12Q8NG77 320 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 TMEM239Q8WW34 195 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 HIST1H2ACQ93077 130 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 TPD52L3Q96J77 140 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 FOXN4Q96NZ1 517 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 DOK1Q99704 481 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 CCDC134Q9H6E4 229 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 GID8Q9NWU2 228 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 RIMS3Q9UJD0 308 aa12.33□□□□□ -0.44
RAB28-205ENST00000508274 PIP5K1CO60331 668 aa12.32□□□□□ -0.44
RAB28-205ENST00000508274 OR7A10O76100 309 aa12.32□□□□□ -0.44
RAB28-205ENST00000508274 OR5F1O95221 314 aa12.32□□□□□ -0.44
RAB28-205ENST00000508274 IGHV4-31P0DP07 118 aa12.32□□□□□ -0.44
RAB28-205ENST00000508274 ZNF35P13682 527 aa12.32□□□□□ -0.44
RAB28-205ENST00000508274 ZNF16P17020 682 aaPredicted RBP12.32□□□□□ -0.44
RAB28-205ENST00000508274 NR4A1P22736 598 aa12.32□□□□□ -0.44
RAB28-205ENST00000508274 KDELR2P33947 212 aa12.32□□□□□ -0.44
RAB28-205ENST00000508274 LSM11P83369 360 aaKnown RBP eCLIP12.32□□□□□ -0.44
RAB28-205ENST00000508274 MYBPC1Q00872 1141 aa12.32□□□□□ -0.44
RAB28-205ENST00000508274 HIPK1Q86Z02 1210 aa12.32□□□□□ -0.44
RAB28-205ENST00000508274 ZNF584Q8IVC4 421 aa12.32□□□□□ -0.44
RAB28-205ENST00000508274 MICU2Q8IYU8 434 aa12.32□□□□□ -0.44
RAB28-205ENST00000508274 IL17RDQ8NFM7 739 aa12.32□□□□□ -0.44
RAB28-205ENST00000508274 ZNF347Q96SE7 839 aa12.32□□□□□ -0.44
RAB28-205ENST00000508274 SH3GL3Q99963 347 aa12.32□□□□□ -0.44
RAB28-205ENST00000508274 PIMREGQ9BSJ6 248 aa12.32□□□□□ -0.44
RAB28-205ENST00000508274 TMEM38BQ9NVV0 291 aa12.32□□□□□ -0.44
RAB28-205ENST00000508274 CMTM6Q9NX76 183 aa12.32□□□□□ -0.44
RAB28-205ENST00000508274 IGHV4-61A0A0C4DH41 118 aa12.31□□□□□ -0.44
RAB28-205ENST00000508274 DHHO43323 396 aa12.31□□□□□ -0.44
RAB28-205ENST00000508274 UBL3O95164 117 aa12.31□□□□□ -0.44
RAB28-205ENST00000508274 RAB36O95755 333 aa12.31□□□□□ -0.44
RAB28-205ENST00000508274 BCL10O95999 233 aa12.31□□□□□ -0.44
RAB28-205ENST00000508274 QDPRP09417 244 aa12.31□□□□□ -0.44
RAB28-205ENST00000508274 AQP2P41181 271 aa12.31□□□□□ -0.44
RAB28-205ENST00000508274 RBM34P42696 430 aaKnown RBP12.31□□□□□ -0.44
RAB28-205ENST00000508274 NR4A2P43354 598 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms