RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 MKKSQ9NPJ1 570 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-206ENST00000507875 FGF21Q9NSA1 209 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 C14orf105Q9NVL8 296 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 FAM118AQ9NWS6 357 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 CALML5Q9NZT1 146 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 RSL24D1Q9UHA3 163 aaKnown RBP6.42□□□□□ -1.38
CLCN3-206ENST00000507875 C3orf18Q9UK00 162 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 WASHC1A8K0Z3 465 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 KDM4EB2RXH2 506 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-206ENST00000507875 F8WDY8 70 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 BRI3O95415 125 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 GPANK1O95872 356 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 CPMP14384 443 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 NQO2P16083 231 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 M6PRP20645 277 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 EFNA1P20827 205 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-206ENST00000507875 RORAP35398 523 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 CCT3P49368 545 aaKnown RBP6.42□□□□□ -1.38
CLCN3-206ENST00000507875 HLCSP50747 726 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 CDK9P50750 372 aaKnown RBP6.42□□□□□ -1.38
CLCN3-206ENST00000507875 NCBP2P52298 156 aaKnown RBP eCLIP6.42□□□□□ -1.38
CLCN3-206ENST00000507875 ACTBP60709 375 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 ESRRGP62508 458 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 ACTA2P62736 377 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 ACTG1P63261 375 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 ACTG2P63267 376 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 ACTC1P68032 377 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 ACTA1P68133 377 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 PPP1R8Q12972 351 aaKnown RBP6.42□□□□□ -1.38
CLCN3-206ENST00000507875 TP53BP2Q13625 1128 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 TRIP6Q15654 476 aaKnown RBP6.42□□□□□ -1.38
CLCN3-206ENST00000507875 ZBED5Q49AG3 693 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 GCNT6Q5T4J0 391 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 CBLL1Q75N03 491 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 DOK3Q7L591 496 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 GPR141Q7Z602 305 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 S100A7AQ86SG5 101 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 C8orf59Q8N0T1 100 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-206ENST00000507875 EXD3Q8N9H8 876 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 ZNF555Q8NEP9 628 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 OR1L3Q8NH93 324 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 HSD17B8Q92506 261 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 PHYHIPQ92561 330 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 DPF1Q92782 380 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 RASD2Q96D21 266 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 OMA1Q96E52 524 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 MBOAT4Q96T53 435 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 NPAS1Q99742 590 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 KCNS3Q9BQ31 491 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 ING2Q9H160 280 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 SLCO1C1Q9NYB5 712 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 ANGPT4Q9Y264 503 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 RBMX2Q9Y388 322 aaKnown RBP6.42□□□□□ -1.38
CLCN3-206ENST00000507875 U3KQV3 271 aa6.42□□□□□ -1.38
CLCN3-206ENST00000507875 IGLV3-12A0A075B6K2 115 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 SEMG1P04279 462 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 IL6RP08887 468 aaPredicted RBP6.41□□□□□ -1.38
CLCN3-206ENST00000507875 FCGR2AP12318 317 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 FBLP22087 321 aaKnown RBP6.41□□□□□ -1.38
CLCN3-206ENST00000507875 PRKACGP22612 351 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 FPR3P25089 353 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 ELK4P28324 431 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 XKP51811 444 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 C16orf72Q14CZ0 275 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 PNLIPRP3Q17RR3 467 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 SPDYE7PQ495Y7 208 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 PHYHD1Q5SRE7 291 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 DCST1Q5T197 706 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 OR2T5Q6IEZ7 315 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 TMEM88Q6PEY1 159 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 EIF3MQ7L2H7 374 aaKnown RBP6.41□□□□□ -1.38
CLCN3-206ENST00000507875 C6orf120Q7Z4R8 191 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 LGI4Q8N135 537 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 OR9A4Q8NGU2 314 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 OR2T29Q8NH02 315 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 HAS2Q92819 552 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 CIDECQ96AQ7 238 aaPredicted RBP6.41□□□□□ -1.38
CLCN3-206ENST00000507875 CNRIP1Q96F85 164 aaPredicted RBP6.41□□□□□ -1.38
CLCN3-206ENST00000507875 SLC35G5Q96KT7 338 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 ASCL2Q99929 193 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 SPRTNQ9H040 489 aaPredicted RBP6.41□□□□□ -1.38
CLCN3-206ENST00000507875 FOLH1BQ9HBA9 442 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 DIABLOQ9NR28 239 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 PRTFDC1Q9NRG1 225 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 MTCH1Q9NZJ7 389 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 KCNN3Q9UGI6 736 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 IFT52Q9Y366 437 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 SCN3AQ9NY46 2000 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 A0A0G2JN53 185 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 LOC100130705A0A1B0GUX0 176 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 MARCH11A6NNE9 402 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 DPM1O60762 260 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 TRMUO75648 421 aaKnown RBP6.41□□□□□ -1.38
CLCN3-206ENST00000507875 ITGB2P05107 769 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 FABP3P05413 133 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 FOLR1P15328 257 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 PCSK6P29122 969 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 PIGAP37287 484 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 YAP1P46937 504 aaKnown RBP6.41□□□□□ -1.38
CLCN3-206ENST00000507875 ZSWIM7Q19AV6 140 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms