RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 MCRIP2Q9BUT9 160 aaKnown RBP3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 DDA1Q9BW61 102 aa3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 NPFFR1Q9GZQ6 430 aa3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 CCDC90BQ9GZT6 254 aa3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 RBM38Q9H0Z9 239 aaKnown RBP3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 C5orf66Q9H5L9 145 aa3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 PATZ1Q9HBE1 687 aaKnown RBP3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 TMBIM4Q9HC24 238 aa3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 KRCC1Q9NPI7 259 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 SLC52A3Q9NQ40 469 aa3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 FBXO8Q9NRD0 319 aa3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 PHPT1Q9NRX4 125 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 C2orf42Q9NWW7 574 aa3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 SDHAF2Q9NX18 166 aa3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 IMPAD1Q9NX62 359 aa3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 CYB5R1Q9UHQ9 305 aa3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 GINS2Q9Y248 185 aa3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 FARSAQ9Y285 508 aaKnown RBP3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 YARS2Q9Y2Z4 477 aaKnown RBP3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 MMACHCQ9Y4U1 282 aa3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 VPS8Q8N3P4 1428 aa3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 ABCB11O95342 1321 aa3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 PCDH11YQ9BZA8 1340 aa3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 ATP10AO60312 1499 aa3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 ABCA5Q8WWZ7 1642 aa3.15□□□□□ -1.91
HMGB3P15-201ENST00000507326 PBRM1Q86U86 1689 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 ZNF816-ZNF321PA0A0X1KG74 233 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 SLC22A20A6NK97 555 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 ZNF729A6NN14 1252 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 A8MVM7 634 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 ZNF732B4DXR9 585 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 FTCDNL1E5RQL4 147 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 RHODO00212 210 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 PSMD12O00232 456 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 PLPP1O14494 284 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 TNFRSF13BO14836 293 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 WNT9BO14905 357 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 MAGEB4O15481 346 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 SLC16A7O60669 478 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 RFPL2O75678 378 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 NEURL1O76050 574 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 SOX30O94993 753 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 RCBTB2O95199 551 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 CTDNEP1O95476 244 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 SEC24AO95486 1093 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 MT-ND4P03905 459 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 GP1BAP07359 652 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 MELTFP08582 738 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 COX5BP10606 129 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 SLC2A1P11166 492 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 FGF3P11487 239 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 IFI30P13284 250 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 CYP11B1P15538 503 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 GPX3P22352 226 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 GJB2P29033 226 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 IL12AP29459 219 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 NTSP30990 170 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 EIF2S3P41091 472 aaKnown RBP3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 COMPP49747 757 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 PKNOX1P55347 436 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 TAS2R39P59534 338 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 AP1S1P61966 158 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 RPS4XP62701 263 aaKnown RBP3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 BTN3A2P78410 334 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 FLI1Q01543 452 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 RIPPLY1Q0D2K3 151 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 C2orf80Q0P641 193 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 BNIP2Q12982 314 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 SELENBP1Q13228 472 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 KRR1Q13601 381 aaKnown RBP3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 ARL6IP1Q15041 203 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 TOMM34Q15785 309 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 GTDC1Q4AE62 458 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 TMEM35AQ53FP2 167 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 EIPR1Q53HC9 387 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 SLC35D3Q5M8T2 416 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 DCST2Q5T1A1 773 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 HIST2H2BCQ6DN03 193 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 HIST2H2BDQ6DRA6 164 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 OR8G2PQ6IF36 304 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 ACSM5Q6NUN0 579 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 UQCC3Q6UW78 93 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 C3P1Q6ZMU1 363 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 LANCL3Q6ZV70 420 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 DPPA2Q7Z7J5 298 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 HPS6Q86YV9 775 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 CALHM1Q8IU99 346 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 ZNF34Q8IZ26 560 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 IQCF1Q8N6M8 205 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 C15orf54Q8N8G6 183 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 CDRT4Q8N9R6 151 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 OR5L1Q8NGL2 311 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 OR52E5Q8NH55 327 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 PLPPR1Q8TBJ4 325 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 FBXO25Q8TCJ0 367 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 CXorf40AQ8TE69 158 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 C16orf78Q8WTQ4 265 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 FAM222BQ8WU58 562 aa3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 SMAP2Q8WU79 429 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P15-201ENST00000507326 ERGIC1Q969X5 290 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms