RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 F13BP05160 661 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 CDH2P19022 906 aaPredicted RBP13.06□□□□□ -0.32
DSP-203ENST00000506617 IGFBP5P24593 272 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 SSTR2P30874 369 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 SDHAP31040 664 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 CCKARP32238 428 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 RPL4P36578 427 aaKnown RBP13.06□□□□□ -0.32
DSP-203ENST00000506617 CD79BP40259 229 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 CTXN1P60606 82 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 IL1RL1Q01638 556 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 FAM27E3Q08E93 113 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 C1QTNF12Q5T7M4 302 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 OGFRL1Q5TC84 451 aaPredicted RBP13.06□□□□□ -0.32
DSP-203ENST00000506617 TFAP2EQ6VUC0 442 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 THSD4Q6ZMP0 1018 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 NUFIP2Q7Z417 695 aaKnown RBP13.06□□□□□ -0.32
DSP-203ENST00000506617 ADCK1Q86TW2 530 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 TMEM123Q8N131 208 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 LNX2Q8N448 690 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 CBR4Q8N4T8 237 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 OR2T33Q8NG76 320 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 LINC01560Q8TB33 94 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 SAMD8Q96LT4 415 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 OR2M2Q96R28 347 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 KATNB1Q9BVA0 655 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 GABARAPL3Q9BY60 117 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 MRPL13Q9BYD1 178 aaKnown RBP13.06□□□□□ -0.32
DSP-203ENST00000506617 GRHPRQ9UBQ7 328 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 MALT1Q9UDY8 824 aa13.06□□□□□ -0.32
DSP-203ENST00000506617 MAST4O15021 2626 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 FBN2P35556 2912 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 SLC35F4A4IF30 521 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 TUBAL3A6NHL2 446 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 C11orf98E9PRG8 122 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 RPL36A-HNRNPH2H7BZ11 118 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 PDLIM1O00151 329 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 BHLHE40O14503 412 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 EI24O14681 340 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 SLC43A1O75387 559 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 IGHG1P01857 330 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 NTF4P34130 210 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 GIPRP48546 466 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 RAD23AP54725 363 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 CLDN17P56750 224 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 P2RY6Q15077 328 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 TRIP10Q15642 601 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 HIST3H3Q16695 136 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 SLC36A3Q495N2 470 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 FBXW9Q5XUX1 488 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 Q6ZT83 130 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 BEND4Q6ZU67 534 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 ABHD12BQ7Z5M8 362 aaPredicted RBP13.05□□□□□ -0.32
DSP-203ENST00000506617 C20orf196Q8IYI0 205 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 ZNF100Q8IYN0 542 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 ZNF519Q8TB69 540 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 TEX47Q8TBZ9 253 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 ASB10Q8WXI3 467 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 ZNF566Q969W8 418 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 BOD1Q96IK1 185 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 TXNDC15Q96J42 360 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 ALG12Q9BV10 488 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 IFT27Q9BW83 186 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 TEX12Q9BXU0 123 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 POLDIP3Q9BY77 421 aaKnown RBP13.05□□□□□ -0.32
DSP-203ENST00000506617 RASSF4Q9H2L5 321 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 SLCO5A1Q9H2Y9 848 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 EGLN3Q9H6Z9 239 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 SMURF2Q9HAU4 748 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 SLC25A19Q9HC21 320 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 ELOVL5Q9NYP7 299 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 ORC6Q9Y5N6 252 aa13.05□□□□□ -0.32
DSP-203ENST00000506617 H0YJX3 145 aa13.04□□□□□ -0.32
DSP-203ENST00000506617 H3BN98 237 aa13.04□□□□□ -0.32
DSP-203ENST00000506617 ZNF133P52736 654 aaPredicted RBP13.04□□□□□ -0.32
DSP-203ENST00000506617 CRISP1P54107 249 aa13.04□□□□□ -0.32
DSP-203ENST00000506617 BIDP55957 195 aa13.04□□□□□ -0.32
DSP-203ENST00000506617 ERVK-25P63136 954 aa13.04□□□□□ -0.32
DSP-203ENST00000506617 CDK5Q00535 292 aa13.04□□□□□ -0.32
DSP-203ENST00000506617 SLC27A4Q6P1M0 643 aa13.04□□□□□ -0.32
DSP-203ENST00000506617 CASP12Q6UXS9 341 aa13.04□□□□□ -0.32
DSP-203ENST00000506617 MAGEE2Q8TD90 523 aaPredicted RBP13.04□□□□□ -0.32
DSP-203ENST00000506617 FAM222BQ8WU58 562 aa13.04□□□□□ -0.32
DSP-203ENST00000506617 TMEM54Q969K7 222 aa13.04□□□□□ -0.32
DSP-203ENST00000506617 ZNF775Q96BV0 537 aaPredicted RBP13.04□□□□□ -0.32
DSP-203ENST00000506617 TSPAN32Q96QS1 320 aa13.04□□□□□ -0.32
DSP-203ENST00000506617 KCNK17Q96T54 332 aa13.04□□□□□ -0.32
DSP-203ENST00000506617 USB1Q9BQ65 265 aaKnown RBP13.04□□□□□ -0.32
DSP-203ENST00000506617 TSSK6Q9BXA6 273 aa13.04□□□□□ -0.32
DSP-203ENST00000506617 PLA2G12AQ9BZM1 189 aa13.04□□□□□ -0.32
DSP-203ENST00000506617 TBC1D23Q9NUY8 699 aa13.04□□□□□ -0.32
DSP-203ENST00000506617 MED29Q9NX70 200 aa13.04□□□□□ -0.32
DSP-203ENST00000506617 NKX1-2Q9UD57 310 aaPredicted RBP13.04□□□□□ -0.32
DSP-203ENST00000506617 ZNF346Q9UL40 294 aaKnown RBP13.04□□□□□ -0.32
DSP-203ENST00000506617 ABCA4P78363 2273 aa13.03□□□□□ -0.32
DSP-203ENST00000506617 SH3D21A4FU49 640 aa13.03□□□□□ -0.32
DSP-203ENST00000506617 SOCS2O14508 198 aa13.03□□□□□ -0.32
DSP-203ENST00000506617 XKRYO14609 159 aa13.03□□□□□ -0.32
DSP-203ENST00000506617 ATP6V1G2O95670 118 aa13.03□□□□□ -0.32
DSP-203ENST00000506617 HMGN1P05114 100 aa13.03□□□□□ -0.32
DSP-203ENST00000506617 PGA4P0DJD7 388 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms