RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 GLAP06280 429 aa14.5□□□□□ -0.09
SCLT1-208ENST00000506368 ALKBH1Q13686 389 aaKnown RBP14.5□□□□□ -0.09
SCLT1-208ENST00000506368 ZNF684Q5T5D7 378 aa14.5□□□□□ -0.09
SCLT1-208ENST00000506368 MRPL2Q5T653 305 aaKnown RBP14.5□□□□□ -0.09
SCLT1-208ENST00000506368 LIPNQ5VXI9 398 aa14.5□□□□□ -0.09
SCLT1-208ENST00000506368 FAHD2BQ6P2I3 314 aaPredicted RBP14.5□□□□□ -0.09
SCLT1-208ENST00000506368 GABRG1Q8N1C3 465 aa14.5□□□□□ -0.09
SCLT1-208ENST00000506368 ZNF561Q8N587 486 aa14.5□□□□□ -0.09
SCLT1-208ENST00000506368 OR5AK2Q8NH90 309 aa14.5□□□□□ -0.09
SCLT1-208ENST00000506368 RGP1Q92546 391 aaPredicted RBP14.5□□□□□ -0.09
SCLT1-208ENST00000506368 SAT2Q96F10 170 aaPredicted RBP14.5□□□□□ -0.09
SCLT1-208ENST00000506368 FAHD2AQ96GK7 314 aa14.5□□□□□ -0.09
SCLT1-208ENST00000506368 HSPA12BQ96MM6 686 aa14.5□□□□□ -0.09
SCLT1-208ENST00000506368 MNTQ99583 582 aa14.5□□□□□ -0.09
SCLT1-208ENST00000506368 TLNRD1Q9H1K6 362 aa14.5□□□□□ -0.09
SCLT1-208ENST00000506368 MEPEQ9NQ76 525 aaPredicted RBP14.5□□□□□ -0.09
SCLT1-208ENST00000506368 OR10H1Q9Y4A9 318 aa14.5□□□□□ -0.09
SCLT1-208ENST00000506368 PRRC2BQ5JSZ5 2229 aaKnown RBP14.49□□□□□ -0.09
SCLT1-208ENST00000506368 A0A0A6YYH2 397 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 A0A0G2JN53 185 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 A6NJ64 397 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 SULT2B1O00204 365 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 LEFTY2O00292 366 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 ARPC3O15145 178 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 WNT11O96014 354 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 PTHLHP12272 177 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 CERS1P27544 350 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 PPM1AP35813 382 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 PSMB10P40306 273 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 NAA10P41227 235 aaPredicted RBP14.49□□□□□ -0.09
SCLT1-208ENST00000506368 MAP3K8P41279 467 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 NKPD1Q17RQ9 610 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 FCRLBQ6BAA4 426 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 TMEM71Q6P5X7 295 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 ZCCHC12Q6PEW1 402 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 USP53Q70EK8 1073 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 ADIPOR2Q86V24 386 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 LRRC25Q8N386 305 aaPredicted RBP14.49□□□□□ -0.09
SCLT1-208ENST00000506368 OR5AP2Q8NGF4 316 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 PIK3IP1Q96FE7 263 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 TMEM41AQ96HV5 264 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 AICDAQ9GZX7 198 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 TRPV4Q9HBA0 871 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 MOKQ9UQ07 419 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 POMT1Q9Y6A1 747 aa14.49□□□□□ -0.09
SCLT1-208ENST00000506368 TRBV5-7A0A0A0MS05 114 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 A0A0B4J2E0 115 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 A0A1B0GX12 115 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 HIDE1A8MVS5 230 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 RNGTTO60942 597 aaKnown RBP14.48□□□□□ -0.09
SCLT1-208ENST00000506368 PRKRAO75569 313 aaKnown RBP14.48□□□□□ -0.09
SCLT1-208ENST00000506368 HTR3BO95264 441 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 RAB3DO95716 219 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 SOD2P04179 222 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 IFI6P09912 130 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 GABRR2P28476 465 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 PNLIPRP2P54317 469 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 TAF13Q15543 124 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 HMGN3Q15651 99 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 PLPP4Q5VZY2 271 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 AWAT2Q6E213 333 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 DPY19L2P2Q6ZN68 376 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 LRRTM4Q86VH4 590 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 BAP18Q8IXM2 172 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 ZNF595Q8IYB9 648 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 OR4K14Q8NGD5 310 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 STK35Q8TDR2 534 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 GPR148Q8TDV2 347 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 PPP1R1CQ8WVI7 109 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 ZBTB8AQ96BR9 441 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 TNFRSF13CQ96RJ3 184 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 STACQ99469 402 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 TEX13DA0A0J9YY54 714 aaPredicted RBP14.48□□□□□ -0.09
SCLT1-208ENST00000506368 COLCA2A8K830 154 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 BLOC1S5-TXNDC5H3BN57 136 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 PHYHO14832 338 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 FADS1O60427 444 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 GLCEO94923 617 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 ACTL6AO96019 429 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 CD3DP04234 171 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 C8orf89P0DMQ9 161 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 HIST1H1CP16403 213 aaKnown RBP14.48□□□□□ -0.09
SCLT1-208ENST00000506368 ADRA2CP18825 462 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 MPZP25189 248 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 ADH7P40394 386 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 DHRS2Q13268 280 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 HABP2Q14520 560 aaPredicted RBP14.48□□□□□ -0.09
SCLT1-208ENST00000506368 MEF2DQ14814 521 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 EIF2S3LQ2VIR3 472 aaKnown RBP14.48□□□□□ -0.09
SCLT1-208ENST00000506368 ZNF750Q32MQ0 723 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 ASTLQ6HA08 431 aaPredicted RBP14.48□□□□□ -0.09
SCLT1-208ENST00000506368 MAMSTRQ6ZN01 415 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 TMEM200AQ86VY9 491 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 GALNT16Q8N428 558 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 C2CD4CQ8TF44 421 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 CCDC74AQ96AQ1 378 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 NMNAT2Q9BZQ4 307 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 TRIM2Q9C040 744 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 COMMD4Q9H0A8 199 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 IL21RQ9HBE5 538 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms