RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 ACP2P11117 423 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 IRF2P14316 349 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 HRH2P25021 359 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 CD1CP29017 333 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 BRS3P32247 399 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 IDH3GP51553 393 aaPredicted RBP2.05□□□□□ -2.08
NEDD4-205ENST00000506154 CCR6P51684 374 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 ACLYP53396 1101 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 STXBP1P61764 594 aaKnown RBP2.05□□□□□ -2.08
NEDD4-205ENST00000506154 TIAL1Q01085 375 aaKnown RBP eCLIP2.05□□□□□ -2.08
NEDD4-205ENST00000506154 FOXM1Q08050 763 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 LAMTOR4Q0VGL1 99 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 FABP9Q0Z7S8 132 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 SKP2Q13309 424 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 PPIGQ13427 754 aaKnown RBP eCLIP2.05□□□□□ -2.08
NEDD4-205ENST00000506154 SSX1Q16384 188 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 CCL15Q16663 113 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 ALG10BQ5I7T1 473 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 HLA-DQA1Q5Y7H0 255 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 ZNF787Q6DD87 383 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 LANCL3Q6ZV70 420 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 GATSQ8NAP1 163 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 BBS1Q8NFJ9 593 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 OR7A2PQ8NGA2 310 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 WDR36Q8NI36 951 aaKnown RBP2.05□□□□□ -2.08
NEDD4-205ENST00000506154 NEK7Q8TDX7 302 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 CDS1Q92903 461 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 COQ8BQ96D53 544 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 GALNT14Q96FL9 552 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 TGM7Q96PF1 710 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 C11orf70Q9BRQ4 267 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 ERVK-6Q9BXR3 956 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 TBL1XR1Q9BZK7 514 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 MRPL18Q9H0U6 180 aaKnown RBP2.05□□□□□ -2.08
NEDD4-205ENST00000506154 LMAN1LQ9HAT1 526 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 NOX3Q9HBY0 568 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 C14orf105Q9NVL8 296 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 NDUFAF4Q9P032 175 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 RAPGEFL1Q9UHV5 662 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 BAIAP2Q9UQB8 552 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 LSM4Q9Y4Z0 139 aaKnown RBP2.05□□□□□ -2.08
NEDD4-205ENST00000506154 LRRK1Q38SD2 2015 aa2.05□□□□□ -2.08
NEDD4-205ENST00000506154 ARHGEF17Q96PE2 2063 aaPredicted RBP2.04□□□□□ -2.08
NEDD4-205ENST00000506154 B4GALT5O43286 388 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 SLC19A2O60779 497 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 TRUB2O95900 331 aaKnown RBP2.04□□□□□ -2.08
NEDD4-205ENST00000506154 MT-ND2P03891 347 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 C8AP07357 584 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 FCGR2AP12318 317 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 CR2P20023 1033 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 COL8A1P27658 744 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 ACADLP28330 430 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 EEF1DP29692 281 aaKnown RBP2.04□□□□□ -2.08
NEDD4-205ENST00000506154 OMPP47874 163 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 PPOXP50336 477 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 CRISP1P54107 249 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 SNRPD2P62316 118 aaKnown RBP2.04□□□□□ -2.08
NEDD4-205ENST00000506154 BTG2P78543 158 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 SURF2Q15527 256 aaPredicted RBP2.04□□□□□ -2.08
NEDD4-205ENST00000506154 ZNF311Q5JNZ3 666 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 PRAMEF20Q5VT98 475 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 ZNF774Q6NX45 483 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 ARMC6Q6NXE6 501 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 DHRS11Q6UWP2 260 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 LCNL1Q6ZST4 164 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 DDIASQ8IXT1 998 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 ZNF808Q8N4W9 903 aaPredicted RBP2.04□□□□□ -2.08
NEDD4-205ENST00000506154 OR51A7Q8NH64 312 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 RNASE11Q8TAA1 199 aaKnown RBP2.04□□□□□ -2.08
NEDD4-205ENST00000506154 MITD1Q8WV92 249 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 CCDC124Q96CT7 223 aaKnown RBP2.04□□□□□ -2.08
NEDD4-205ENST00000506154 NOX4Q9NPH5 578 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 PRR13Q9NZ81 148 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 PHF11Q9UIL8 331 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 ST6GALNAC2Q9UJ37 374 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 HDGFL3Q9Y3E1 203 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 CCL27Q9Y4X3 112 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 TMEM265A0A087WTH1 108 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 CLEC18AA5D8T8 446 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 TMEM191CA6NGB0 347 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 FAM159BA6NKW6 160 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 VWC2LB2RUY7 222 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 C9J4A7 227 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 F8VVB4 439 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 F8VWA3 439 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 H3BMH7 237 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 MRASO14807 208 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 ZNF264O43296 627 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 RECQL5O94762 991 aaPredicted RBP2.04□□□□□ -2.08
NEDD4-205ENST00000506154 SLC16A8O95907 504 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 IGHEP01854 428 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 RLN1P04808 185 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 SERPINE1P05121 402 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 SNRPCP09234 159 aaKnown RBP2.04□□□□□ -2.08
NEDD4-205ENST00000506154 ZGLP1P0C6A0 271 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 TMEM191BP0C7N4 346 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 GZMBP10144 247 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 FGF5P12034 268 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 GGT2P36268 569 aa2.04□□□□□ -2.08
NEDD4-205ENST00000506154 NAPAP54920 295 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms