RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 UPK3AO75631 287 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 GABARAPO95166 117 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 CDRT1O95170 752 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 IFNB1P01574 187 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 RPL13AP40429 203 aaKnown RBP1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 GPR6P46095 362 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 CCR8P51685 355 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 CRYBB1P53674 252 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 SUB1P53999 127 aaKnown RBP eCLIP1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 ERVK-25P63136 954 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 LOXL1Q08397 574 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 SCRN3Q0VDG4 424 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 PON3Q15166 354 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 ZNF493Q6ZR52 646 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 H2AFVQ71UI9 128 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 MREGQ8N565 214 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 ANKFN1Q8N957 763 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 TRMT10AQ8TBZ6 339 aaKnown RBP1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 FAM110BQ8TC76 370 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 L3HYPDHQ96EM0 354 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 MED8Q96G25 268 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 RNF5Q99942 180 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 THUMPD2Q9BTF0 503 aaKnown RBP1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 YY1AP1Q9H869 796 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 PIPOXQ9P0Z9 390 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 PSG8Q9UQ74 426 aa1.49□□□□□ -2.17
HMGB1P29-201ENST00000505659 XPO1O14980 1071 aaKnown RBP1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 BCHEP06276 602 aa1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 CHI3L1P36222 383 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 PPT1P50897 306 aa1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 PITPNAQ00169 270 aa1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 ZNF816Q0VGE8 651 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 MESDQ14696 234 aa1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 GANABQ14697 944 aaKnown RBP1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 POU2AF1Q16633 256 aa1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 PHYHD1Q5SRE7 291 aa1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 DNAJC24Q6P3W2 148 aa1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 CEMP1Q6PRD7 247 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 KDM7AQ6ZMT4 941 aa1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 UTS2BQ765I0 119 aa1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 ZDHHC21Q8IVQ6 265 aa1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 PUSL1Q8N0Z8 303 aaKnown RBP1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 CCDC110Q8TBZ0 833 aa1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 PYROXD1Q8WU10 500 aa1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 CXorf40BQ96DE9 158 aa1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 MS4A4EQ96PG1 132 aa1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 SLC38A2Q96QD8 506 aa1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 EXD2Q9NVH0 621 aa1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 TAS2R3Q9NYW6 316 aa1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 KIAA1257Q9ULG3 409 aa1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 AURKCQ9UQB9 309 aa1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 CARHSP1Q9Y2V2 147 aaKnown RBP1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 S4R3C0 116 aa1.48□□□□□ -2.17
HMGB1P29-201ENST00000505659 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 IGLV1-50A0A075B6I6 118 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 IGHV3-74A0A0B4J1X5 117 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 ZNF726A6NNF4 738 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 HIDE1A8MVS5 230 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 FABP3P05413 133 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 TCN1P20061 433 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 SLC2A5P22732 501 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 COL8A2P25067 703 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 CCR1P32246 355 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 RORAP35398 523 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 OPRD1P41143 372 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 CDK16Q00536 496 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 NCBP1Q09161 790 aaKnown RBP1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 SLC39A6Q13433 755 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 GINS1Q14691 196 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 IGFBP7Q16270 282 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 SLC36A3Q495N2 470 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 TRIM40Q6P9F5 258 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 ZNF683Q8IZ20 524 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 ZNF557Q8N988 423 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 MFSD9Q8NBP5 474 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 NECAP1Q8NC96 275 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 TM4SF18Q96CE8 201 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 FAIM2Q9BWQ8 316 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 LINC00597Q9H2U6 94 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 MCCC2Q9HCC0 563 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 MRPL47Q9HD33 250 aaKnown RBP1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 HMG20AQ9NP66 347 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 PALMDQ9NP74 551 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 GPATCH2LQ9NWQ4 482 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 RNF14Q9UBS8 474 aa1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 RPAP1Q9BWH6 1393 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P29-201ENST00000505659 CCDC182A6NF36 153 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 ZNF850A8MQ14 1090 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 CBR3O75828 277 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 SLC25A14O95258 325 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 UGT2B4P06133 528 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 GNAO1P09471 354 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 KRT13P13646 458 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 NCK1P16333 377 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 NAMPTP43490 491 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 RFX3P48380 749 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 CSNK1A1P48729 337 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 SLC11A1P49279 550 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 CBX1P83916 185 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 HTD2P86397 168 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms